Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1557 ATGGATGAAATATCTCCGGCGGCTAGTAGTGGTGGTCGGAGGGTTTCTACCGGTAAGGAGCAGCAAGCCGCCGGCGTCGGAATTCTTCTTCAGATAATGATGTTAGTCTTGTCCTTCGTTCTTGGTCACGTTCTCCGTCGCAAAAAGGTTTACATCATTCCTGAAGCTAGTGCTTCTCTTCTCATTGGTTTGATTGTTGGTATTCTAGCTAATATATCTGACACTGAAACTAGCATAAGGGCTTGTTATCTTGGTGGCTTGATCTACCTCATGTATAGACTACCTTTTGTTGAGTGCCTAATGTTTGGTGCACTTATATCAGCAACTGATCCTGTTACTGTTTTGTCTATATTTCAGGAGCTTGGCACCGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACGATGTCAATGGTTAAAGCTGACCCATCTGGACAAAATTTATTCATGTTGGTTGTTAGGTTTTTGGAGACTTTTTTTGGGTCAATGTCTGCAGCTTTGAATTTTGGTCATGCTATTGAAGCTTTTACCAGCCTTCAGAATTTGGAGAGCTGTCTATTTGTTCTTTTCCCATATTTCTCGTACATGCTTGCCGAAGGTCTTGGTCTGTCTGGTATTGTATCAATACTGTTCACAGGAATAGTCATGAAGCACTATTCGTACTCAAATTTGTCACAAAGTTCTCAAAAATTTGTCTCCGAATTTTTCGAGTTGATATCATCATTAGCAGAGACATTTATGGCAGCTAATGTCTTCTCTTGTGCTTATCTGGTCAATCTAGTTAGACCCGCACACCGAAAGATACCTCCAAATCACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGAGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGGCCATCTTGACTACAACTACAGCAATAGTTGTGTTGACGGTATTACTGATTGGTGGTTCTACCGGTACAATGCTTGAAGCTCTAGATGTTGTAGGGGGCGACAGTGATAGCCCTTTGGTCTCAGTTGGAACCATCACAAATTACGAGGAACACAGTCGTTATATCGCCCCTTCTTATGAAGAGTTGTCAGCAGGGAGCACAATCAAGATGAAGCTAAAAGAATTTCATAAGAGTGCTACATCTTTTACTGCTTTAGATAAAAACTACCTCACCCCATTCTTTACAAGTCAAAATGGAGATGAAGCGGTGCCCTTAACTTCTTCAAGTTCGGGATTTCGTGGGAATAATCATTATTCATCATGA 1311 0.415 MDEISPAASSGGRRVSTGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKVYIIPEASASLLIGLIVGILANISDTETSIRACYLGGLIYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSMVKADPSGQNLFMLVVRFLETFFGSMSAALNFGHAIEAFTSLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYSYSNLSQSSQKFVSEFFELISSLAETFMAANVFSCAYLVNLVRPAHRKIPPNHQKALWYSGLRGAMAFALALQSVHDLPEGHGQAILTTTTAIVVLTVLLIGGSTGTMLEALDVVGGDSDSPLVSVGTITNYEEHSRYIAPSYEELSAGSTIKMKLKEFHKSATSFTALDKNYLTPFFTSQNGDEAVPLTSSSSGFRGNNHYSS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1557 436 PANTHER SODIUM/HYDROGEN EXCHANGER 261 417 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal5g1557 436 PANTHER SODIUM/HYDROGEN EXCHANGER 16 79 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal5g1557 436 PANTHER SODIUM/HYDROGEN EXCHANGER 82 260 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal5g1557 436 Pfam Sodium/hydrogen exchanger family 57 251 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal5g1557 436 PANTHER SODIUM/HYDROGEN EXCHANGER 6 261 417 - -
Lal5g1557 436 PANTHER SODIUM/HYDROGEN EXCHANGER 6 82 260 - -
Lal5g1557 436 PANTHER SODIUM/HYDROGEN EXCHANGER 6 16 79 - -
Lal5g1557 436 Gene3D - 96 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1557 Lal-Chr5 18150169 18157970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1557 98 335 Antiporters AT3G05030 30.822 2.54e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1557 K14724 - gmx:100790830 550.436