Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1548 ATGTGGCCTGGAAAGTATTCAATTTTCATCTTTTCATCATTCATTCTTCTTTATCTGTTTCAAGCACCTGCTTTTGCTATAAAAAAGCCATACATAGTGTACTTGGGATTCCATGATCATCATCCAGAAGTCACAGAAGCTGATTTTGATCAAGTTACAGAAACTCATCATGAATTTCTTGCCTCCTATTTGGGAAGTTCTGAGAAAGCAAAAGAAGCAATCTTTTATTCTTACACAAAGCATATCAATGGTTTTGCTGCTATTCTTGAAGAGGAAGAAGCTGCTAATATAGCAAAGCATCCAAGTGTTGTGAGAGTATTCTTAAATAAAGGAAGAAACTTACAAACTACACATTCATGGGAATTCATGTTAATGGATGATAATGGCCTAACACACCCAAGTTCCTTGTTTGAAAAGGCCAGATTTGGTGAAGATACTATTATAGGACACCTTGACACTGGTGCATGGCCAGAATCTCCTAGCTTTAGTGATGAGGGTATGGGACCAATTCCTTCAAAGTGGAAAGGAATCTGTCAAAGGGATATTACTGGCTTCAGGTGTAACAGGAAGATCATAGGAGCAAGGTACTTCAACAAAGGGTATGCTGCCTCTGCAGATCCAAGGGCAATGAGAAACATAACACTGAACACAGTAAGAGACTATGAAGGTCATGGTTCACACACACTATCAACATTAGGAGGGAATTTTGTGCATGGTGCAAATGTCTTTGGCTTAGGCAATGGAACAGCCAAAGGTGGTTCCCCTAGAGCAAGGGTTGCAACATACAAGGTGTGTTGGCCGCCGGTTGATGAGAATGAGTGCTTTGATTCTGATATCTTGGCAGCCATTGATGTAGCTATATATGATGGAGTCCATGTTCTTTCACTTTCTCTTGGAGGGTCTGATACTGATTACTCTGATGATGTTCTTGCTATTGGAGCATTTCATGCTGTTAGGAAAGGTATCACTGTAGTGTGTGCAGCTGGGAATTCTGGACCTGCACTTGGAACTGTCTCAAATTCTGCACCTTGGATACTAACTGTAGCTGCAAGTACCTTGGACAGAAAATTTGAAGCTGTTGTTGAACTCCCTAATGGACAGAAGTTCAAGGGACCAAGCCTTTCCAAACCTTTGCCAGAAGATAGACTTTACCCACTCATTAGTGCTAAACATGCAAAAGCGGCTAATGCATCGGATGCAAATGCTGAGCTATGTAAGGTAGGAACAATTGACCCAAGGAAGGTTAAGGGAAAAATATTGGTTTGTCTTAGAGGTGAGAATGCAAGAGTGGAAAAGGGCCTTGTTGCTTTGGAGGCAGGTGCAGCTGGGATGATTCTTTACAATGATGCTCATGATGTATATGACTTTGACCTTACTTCTGACCCACATTTTCTACCAGCAGTAGAACTTACTTATGAAGATGGTCTTGCACTTGTAGCCTACATCAATTCTACCAGGAATCCGATGGCATATCTTCATTCCCCTGAAACCGATTTAAACACAAAGCCTTCTCCATACATGGCGTCTTTTTCGTCTAGAGGACCAAACACTATTACACCAGAGATCCTCAAGCCTGATATAACTGCTCCTGGTGTGAACATTATTGCTGCATACACAGAAGGGAACAGCCCAACAGGGTTGCCGTTTGATAAGCGCAGGTTTCCTTTTATCACAATGTCTGGAACATCCATGGCAACCCCTCATGTGTCTGGAATTGTTGGCCTTCTTAAGACACACCACCCTCATTGGAGTCCTTCAGCCATTAGATCTGCAATAATGACAACAGCTAGGACAAGGGACAACACTGGTAAGCCAATGCTTGATACCAATTCTAAAGAAGCAACACCATATGCACATGGCTCTGGCCACATTAGACCGAATCGCGCTATGGATCCTGGCTTGGTCTATGACTTAACCACCAATGACTACCTAAACTTCCTTTGTGCTTGTGGTTATAACCAGACTCAGATGAGAAGTTTTCCTGATCCTCACCCTTATAGGTGCCATAATGTAGTTAAAATATTGGACTTCAACTACCCTTCAATTTCAATACCTAAACTCTATGGCTCAACTACTGTAACTAGGAAGGTTAAAAATGTTGGTACACCAGGTACTTATGCTGCAAGGCTACATGTACCTGCAGGCCTTAACATATCTGTGGAGCCTAATACATTGAAATTTGACAAGATTGGTGAAGAGAAAAGCTTTCAGTTGATAATTGAAGTCATTAGTCCAAGCCTTGGTGCAGTATTTGGAAGGCTAAGTTGGTCAGATGGGAATCACTATGTGAGGAGTCCAATTGTAGTTGGTGCTATAATGGCTTAG 2325 0.4181 MWPGKYSIFIFSSFILLYLFQAPAFAIKKPYIVYLGFHDHHPEVTEADFDQVTETHHEFLASYLGSSEKAKEAIFYSYTKHINGFAAILEEEEAANIAKHPSVVRVFLNKGRNLQTTHSWEFMLMDDNGLTHPSSLFEKARFGEDTIIGHLDTGAWPESPSFSDEGMGPIPSKWKGICQRDITGFRCNRKIIGARYFNKGYAASADPRAMRNITLNTVRDYEGHGSHTLSTLGGNFVHGANVFGLGNGTAKGGSPRARVATYKVCWPPVDENECFDSDILAAIDVAIYDGVHVLSLSLGGSDTDYSDDVLAIGAFHAVRKGITVVCAAGNSGPALGTVSNSAPWILTVAASTLDRKFEAVVELPNGQKFKGPSLSKPLPEDRLYPLISAKHAKAANASDANAELCKVGTIDPRKVKGKILVCLRGENARVEKGLVALEAGAAGMILYNDAHDVYDFDLTSDPHFLPAVELTYEDGLALVAYINSTRNPMAYLHSPETDLNTKPSPYMASFSSRGPNTITPEILKPDITAPGVNIIAAYTEGNSPTGLPFDKRRFPFITMSGTSMATPHVSGIVGLLKTHHPHWSPSAIRSAIMTTARTRDNTGKPMLDTNSKEATPYAHGSGHIRPNRAMDPGLVYDLTTNDYLNFLCACGYNQTQMRSFPDPHPYRCHNVVKILDFNYPSISIPKLYGSTTVTRKVKNVGTPGTYAARLHVPAGLNISVEPNTLKFDKIGEEKSFQLIIEVISPSLGAVFGRLSWSDGNHYVRSPIVVGAIMA 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1548 774 Gene3D - 647 772 - -
Lal5g1548 774 MobiDBLite consensus disorder prediction 600 624 - -
Lal5g1548 774 CDD Peptidases_S8_3 114 596 IPR034197 -
Lal5g1548 774 Pfam PA domain 395 478 IPR003137 -
Lal5g1548 774 CDD PA_subtilisin_like 360 492 - -
Lal5g1548 774 ProSiteProfiles Serine proteases, subtilase domain profile. 119 630 - -
Lal5g1548 774 Pfam Subtilase family 143 600 IPR000209 GO:0006508|GO:0008236
Lal5g1548 774 SUPERFAMILY Subtilisin-like 136 634 IPR036852 GO:0004252|GO:0006508
Lal5g1548 774 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Lal5g1548 774 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Lal5g1548 774 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Lal5g1548 774 Pfam Peptidase inhibitor I9 31 114 IPR010259 -
Lal5g1548 774 SUPERFAMILY PA domain 408 505 IPR046450 -
Lal5g1548 774 PANTHER BNAC02G33520D PROTEIN 13 770 - -
Lal5g1548 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 115 IPR037045 -
Lal5g1548 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Lal5g1548 774 PANTHER PEPTIDASE S8 13 770 - -
Lal5g1548 774 Gene3D - 354 500 - -
Lal5g1548 774 Gene3D Peptidase S8/S53 domain 145 643 IPR036852 GO:0004252|GO:0006508
Lal5g1548 774 Pfam Fibronectin type-III domain 676 769 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1548 Lal-Chr5 18087467 18092395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1548 19 769 Subtilisin-like Serine Gene Family AT5G59810 63.347 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1548 - - gmx:100808488 1088.94