Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1508 ATGAAGAAGATTTATCGGAAAGGTACAGTTCATCCCTCACCGCCAATCATCACCGACCACCTTGCCTTCCTTCCCGCCGCCATCCTTACCCTCGCGGCGGCGCTCTCACAGGAAGATAGAGAAGTCCTATCTTACCTCATCTCCTGCTCCTCCAACAACTTTTCCAGCAACTCACGCCGGAACGCCGCCGCCGGAGGAGACCACGCTCCGTTGTTCCACTGCAGTTGCTTCCGTTGCTACATGAGTTATTGGGTAAGGTGGGACACTTCACCTAGCCGCCAACTCATACACGAGATCATCGATGCCTTCGAGGATTGGTTGGCGCAACAGAATAATAAGAAAATCAACAATAAGGGTAAGAACGGAAAGAGAGAAAAGCGGAACAGCAAGAAAGGGTTGAATAATAAGAAACGGACCGAGTTAACAGGTTTGGTTAATGACAAGTCGTGTGAGTTGGAATCAGTGGAGAAGATTTGTAACAATAATAGAAAAAGTGGGGAAGAGGTTGAAGTGGAAGAGAAAGGAAGTCGGTTTTGGGGTGTAGGTTTAGTTGGGAAGTTGTTTAGGGGAAAAAACAACATCACTGATTCTCAGTTTATGGGTTATCGACTTCTGACTTCTATAGAGAAGTCGAGTTTTTGGATACAGGCGTCTGGCTTGGCTTACAGTATAAAAATGATGACTGATGAAATGAATAATAATGGTGAAAACTATGAGGGTGTAGATGAAATTGATGTTAGTGAAGATGGAAATATTAATGAAGCAGAGGAGTTTGATTTTGAAGAAATTGATTTTGGATCATTAAACGAAGATGAAGTAAAAAAATATAGAGAGGGATTTAGGGACAAGAAAAATGAATTAATTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTGAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTATGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACGTCGCTTTGATGAACACAATGAGAGAAGTCAGAATTGGAACAGACAAATTTTTTGGTTCATTCGCTGGTCAATCTAGTGGATATCAGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAAACAAAGAAGAATAGGAAATGGTGACGCAGAATCAACATTACAATACTTGAAGGAACAATCAAAATCAGATTCTGCAATGTATTGGAGACATATTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATAGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAAGAAATACAAGTTTTCAGTGGTCATTTTTTCTGGTGTGAACCATCATAAGCAAACAACAGTATTTGCTGCTGGTATTGTGTCTAACGAGACAGAGGAAACTTACGTTTGGCTTCTAGGAAATTTCTTGGAGGCAATGAATGTGAAACATCCAAAGTGTGTTATCATTGATGGTGACTTTGCGATGAAGAATGCAATCAAAAGAGTTTTCCCTGCAGCTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAATAATAACTTTCATAAGGACTTCCAGAAAGTAATGTATGATGATGTTGAGATTGATGATTTTAATATGATGTGGGAGGAACTTATTACTAAACATGGACTTCATAATAATGTTTGGGCATCTCAGATATTTGATTGCAAAAGTATGTGGGCTAGGGTGTTATGTAACCTTGCTTGCGAAACGGATGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGATCAAAACAACACTCTACTTCGATGGAAAATGTTGACAATGCCACTGTAGATCAAGTAAGAGACCCAGTTCGAGTGCGTGCTAAAGGGAGAGTATCGGGGATTACCTCAAGGCCCAAGCGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAGGGCAAGTTGTCCAAATGTTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCGATGAAGAATGA 2118 0.3947 MKKIYRKGTVHPSPPIITDHLAFLPAAILTLAAALSQEDREVLSYLISCSSNNFSSNSRRNAAAGGDHAPLFHCSCFRCYMSYWVRWDTSPSRQLIHEIIDAFEDWLAQQNNKKINNKGKNGKREKRNSKKGLNNKKRTELTGLVNDKSCELESVEKICNNNRKSGEEVEVEEKGSRFWGVGLVGKLFRGKNNITDSQFMGYRLLTSIEKSSFWIQASGLAYSIKMMTDEMNNNGENYEGVDEIDVSEDGNINEAEEFDFEEIDFGSLNEDEVKKYREGFRDKKNELIRKRAPRKETRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDVALMNTMREVRIGTDKFFGSFAGQSSGYQYIGFSKKDMYNQIQKQRRIGNGDAESTLQYLKEQSKSDSAMYWRHIVDEEGKLQQLFWADRCSIFDYSIFGDVLAFDATYGRKKYKFSVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNVKHPKCVIIDGDFAMKNAIKRVFPAAHHRLCAWHICNNAGKNIKNNNFHKDFQKVMYDDVEIDDFNMMWEELITKHGLHNNVWASQIFDCKSMWARVLCNLACETDEDFSEMLEKVYNECGRLRSKQHSTSMENVDNATVDQVRDPVRVRAKGRVSGITSRPKRGNQCGICREIGHNRASCPNVVGSCSRTFDNDFDEE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1508 705 MobiDBLite consensus disorder prediction 114 136 - -
Lal5g1508 705 PANTHER OS02G0262500 PROTEIN 277 602 - -
Lal5g1508 705 Pfam MULE transposase domain 450 544 IPR018289 -
Lal5g1508 705 MobiDBLite consensus disorder prediction 117 133 - -
Lal5g1508 705 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 277 602 IPR031052 GO:0006355
Lal5g1508 705 Pfam FAR1 DNA-binding domain 276 330 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1508 Lal-Chr5 17588070 17593224 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal5g1508 MULE 1.1e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1508 - - lang:109327968 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1508 5 17588070 17593224 Lal3g0251 3 1639588 1642186 LSH
Lal5g1508 5 17588070 17593224 Lal11g0394 11 2906846 2908730 LSH