Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1506 ATGGCAGGCTCATGTTTCCACGGGCTTCGTCTGAGGAAGTCAAAGAGTAATAAACCTTCACAAGCACCTTCTTCTTCTTCTTCCTACAAAGACAAGTTGAAATGTGAAATGGAGAATAATAACATGGAAAGGAAGAGGTTTGATAGCATGGAATCATGGTCCATGATATTAGAGTCTGAGAATGTGGAGACATGGGAGATTCCAAAGGAGGACCAAGAGGAATGGACTGCAGACCTTTCACAACTTTTCATAGGTAACAAGTTTGCTTCTGGAGCTCACAGTAGGATATACCGTGGAATCTACAAGCAAAGAGCAGTGGCTGTGAAAATGGTGAGGATTCCAACACAGGATGAAGACAGAAGAGTCCTATTAGAACAGCAATTTAAGTCTGAAGTGTCTTTGCTGTCATGTCTCTTTCATCATAACATAGTGCAGTTTATTGCAGCATGTAAAAAACCACCAGTGTATTGTATCATAACAGAGTACATGTCACAAGGAACACTGAGGATGTATCTGAATAAGAAAGAGCCATATTCTCTTGCAATAGACACAATACTAAGGTTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCATTCGCGAGGTGTGATTCACAGAGACCTCAAGTCTAATAACTTGCTTCTCAATGATGAGATGAGAGTTAAGGTTGCAGATTTTGGTACATCATGTCTTGAAACTCGATGCCGTGAGACGAAAGGAAACATGGGAACATATCGTTGGATGGCGCCGGAGATGATCAAGGAAAAGCCTTATTCGAGGAAGGTTGATGTCTATAGTTTTGGTATTGTTCTTTGGGAGCTCACGACATGTTTACTTCCATTCCAAGGAATGACTCCAGTGCAAGCTGCTTTTGCTGTTGCTGAGAAGAACGAAAGGCCTCCACTACCAGCTAGTTGTCAACCAGCACTTGCTCATTTGATAAAACGTTGTTGGTCAGAAAACCCTTCTAAGAGACCAGATTTCAGTGATATTGTGTCTACTCTTGAGAAGTACGATGAATGTGTCAAAGAGGGTTTACCTCTAACTCATCATTCAGGTTTAGTCAGTGGCAATGTCATTATTCAACACCTTAAAGGATGTGTCTCTATGACTTCTTCTATACCTGTACATGCCTAG 1140 0.414 MAGSCFHGLRLRKSKSNKPSQAPSSSSSYKDKLKCEMENNNMERKRFDSMESWSMILESENVETWEIPKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEDRRVLLEQQFKSEVSLLSCLFHHNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLAIDTILRLALDISRGMEYLHSRGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYSRKVDVYSFGIVLWELTTCLLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSENPSKRPDFSDIVSTLEKYDECVKEGLPLTHHSGLVSGNVIIQHLKGCVSMTSSIPVHA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1506 379 Gene3D Phosphorylase Kinase; domain 1 70 164 - -
Lal5g1506 379 MobiDBLite consensus disorder prediction 15 30 - -
Lal5g1506 379 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 12 367 - -
Lal5g1506 379 Pfam Protein tyrosine and serine/threonine kinase 84 336 IPR001245 GO:0004672|GO:0006468
Lal5g1506 379 PRINTS Tyrosine kinase catalytic domain signature 160 173 IPR001245 GO:0004672|GO:0006468
Lal5g1506 379 PRINTS Tyrosine kinase catalytic domain signature 198 216 IPR001245 GO:0004672|GO:0006468
Lal5g1506 379 PRINTS Tyrosine kinase catalytic domain signature 244 254 IPR001245 GO:0004672|GO:0006468
Lal5g1506 379 PRINTS Tyrosine kinase catalytic domain signature 263 285 IPR001245 GO:0004672|GO:0006468
Lal5g1506 379 PRINTS Tyrosine kinase catalytic domain signature 307 329 IPR001245 GO:0004672|GO:0006468
Lal5g1506 379 ProSiteProfiles Protein kinase domain profile. 82 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1506 379 Gene3D Transferase(Phosphotransferase) domain 1 165 349 - -
Lal5g1506 379 SMART serkin_6 82 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1506 379 CDD STKc_MAP3K-like 89 336 - -
Lal5g1506 379 MobiDBLite consensus disorder prediction 1 33 - -
Lal5g1506 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lal5g1506 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 12 367 - -
Lal5g1506 379 SUPERFAMILY Protein kinase-like (PK-like) 54 336 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1506 Lal-Chr5 17570452 17575066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1506 1 379 MAP Kinase Kinase Kinase AT1G62400 79.847 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal5g1506 PK_Tyr_Ser-Thr 1.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1506 - - gmx:100803225 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1506 5 17570452 17575066 Lal3g0252 3 1642690 1646549 LSH