Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1502 ATGGGAAAATCAGGGGGTAGGAAAAAAAAGGGTAGTGCTTCAAAATCAAAGCAAGCTTCTGTTGATAATTCAGTTGCTCCAGTTGCTAATGGTGGTGTGGATTTGGATTCCTCAATATTTTTGAAGAGAGCCCATGAGCTCAAAGAAGAGGGAAATGTAAGGTTCCAGAATAAGGACTTTGTTGGTGCCCTACAACAGTATGAGAATGCCCTCAAACTAATCTCTAAGACCCACCCAGATAGGGCTGTTTTCCACAGCAACAGAGCTGCTTGTTTGATGCAAATGAAACCTATTGATTATGAAACTGTGATTGCTGAATGCACCTTGGCGCTTCAGGTGCAGCCTCAATTTGCTAGGGCACTCCTTCGGAGGGCTCGGGCATTTGAGGCTGTAGGGAAGTATGAAATGGCTATGATTGACGTGCAAGTGCTATTGGGAGTTGAACCTAATCATGGGGATGCTTTAGAGATTGTTAGGAGATTGAGGACTGCGTTGGGTACTCGCCAGGAAGCACAGCAGGACCTTCATAGTCGCCCTTCACCTGCTGCCCTTGGTGCTTCTGCGGTCCGTGGTGCTCCGATTGCGGGTTTAGGGCCGTCTTTACCTGCTCGGCCAGGGCCTAAGAAGGTGGCAAGTGCAGCTACTGGATCGGTTGTGTCATCTAATTACAAGCCAGAGAAGCCTCAAGTTATTTTATCATCTGCAAATGGTCCTGAGAACAAGTCACAGTCACCAAAACTTTCGTTGAAACCCTCAATTGTCTCTGCTAATACCTTTAGTCCAAGAAAGGGAAACCAGAAGGAGTTGTTGTCTCATTCAGCAACTGTTCAGCACTCAGAGGTTGTAATTCGGTTGAGACATTTGAAACTTGTTTATGATCATGACATCAGGCTTGCCGAGATGCCAGTGAATTGCAGTTTTAGAGTGCTGAGAGAATTAGTGACCAAGAGATTTCCATCATCAAAGTCAGTTCTGATTAAGTATAAGGATAATGATGGTGATTTGGTGACTATAACATCTACGGAAGAACTCAGATTGGCCGAGCGTAGTGTGGATAGCCATCTCCTGAAAGAACCTGAAGCAGATAAAAGTGATTCAGTTGGGATGCTGAGACTAAATATTGTTGAAGTTAGTCCTGAGCAGGAGCCACCTTTATTGGAAGAAGAGGAAGAAAAACCTGTTGAGAGCGAAGAGATCAAGGGAGATGAGAGTGAGACTCATTCACCCAATGAATCTTTCTCTGAGGCCCCTGATGCTGAAGCTGATAAGATAGAGAAAGATGCACCAAAGGAAAAGCCCGGTGCCACAGAAGCTACTGAATGCAAGGAAGTGGAAATGGACGATTGGTTGTTTGAATTTGCTCAGCTTTTCCGCTCACATGTTGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTGGGGATGGAGTTTTGTTCTGAGGCACTCGAGGAAACCGTCACTGGTGAGGAGGCCCAGGATCTCTTTGACAAAGCTGCTTCGAAGTTCCAGGAGGTGGCTGCTTTGGCATTCTTCAATTGGGGAAATGTTTACATGTGTGCTGCTAGGAAGCGAATCCCCTTAGACGAGTCAGCTGGGGAAGAAGTAGTGGCAGAACGGCTTCAAGTTGCATATGACTGGGTCAAGGAAAAATATACATTGGCAAGGGAGAAGTATGAGCAAGCGCTCGTGATTAAACCAGACTTCTACGAAGGGCTGCTGGCTCTGGGTCAGCAACAATTTGAAATGGCTAAGCTTCATTGGTCTTTTGCACTTGCTAAGAAGATAGATCTATCAAGCTGGGACCCTACAGAGACAATTCAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGCTGCAACTGATATGTGGGAGAAGCTGGAGGAGCAGAGAGCAAAGGAGCTACAAGACCCGAATGCAAGCAAGAAAGAAGAACTATTGAGAAGAAGAAAAAAACAGGGAGGTTCCGCCGAAGGTGAGTCCTCTGCTGTTGGTCAGGGTGATATATCCGCAAAGGAAGCTGCAGAGCAAGCAGCCGTCATGAGATCGCAGATTCACCTTTTCTGGGGTAATATGCTATTTGAAAAATCCCAAGTTGAATGTAAATTAGGAATGGATGATTGGAATAAAAATCTGGATGCTGCAATCGAGCGCTTTAAGCTTGCAGGAGCATCTGAGGCTGATATTTCAATGGTGCTAAAGAATCATTGCTCCAATGGAGATGCAAAGGAAGAAGTTAAAGGACCGAAGAGTCACAACTCGACTGCACTGGCAAAATAG 2280 0.4544 MGKSGGRKKKGSASKSKQASVDNSVAPVANGGVDLDSSIFLKRAHELKEEGNVRFQNKDFVGALQQYENALKLISKTHPDRAVFHSNRAACLMQMKPIDYETVIAECTLALQVQPQFARALLRRARAFEAVGKYEMAMIDVQVLLGVEPNHGDALEIVRRLRTALGTRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPSLPARPGPKKVASAATGSVVSSNYKPEKPQVILSSANGPENKSQSPKLSLKPSIVSANTFSPRKGNQKELLSHSATVQHSEVVIRLRHLKLVYDHDIRLAEMPVNCSFRVLRELVTKRFPSSKSVLIKYKDNDGDLVTITSTEELRLAERSVDSHLLKEPEADKSDSVGMLRLNIVEVSPEQEPPLLEEEEEKPVESEEIKGDESETHSPNESFSEAPDAEADKIEKDAPKEKPGATEATECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMEFCSEALEETVTGEEAQDLFDKAASKFQEVAALAFFNWGNVYMCAARKRIPLDESAGEEVVAERLQVAYDWVKEKYTLAREKYEQALVIKPDFYEGLLALGQQQFEMAKLHWSFALAKKIDLSSWDPTETIQLFDSAEEKMKAATDMWEKLEEQRAKELQDPNASKKEELLRRRKKQGGSAEGESSAVGQGDISAKEAAEQAAVMRSQIHLFWGNMLFEKSQVECKLGMDDWNKNLDAAIERFKLAGASEADISMVLKNHCSNGDAKEEVKGPKSHNSTALAK 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1502 759 MobiDBLite consensus disorder prediction 378 441 - -
Lal5g1502 759 Gene3D Tetratricopeptide repeat domain 41 175 IPR011990 GO:0005515
Lal5g1502 759 Gene3D - 286 357 - -
Lal5g1502 759 MobiDBLite consensus disorder prediction 197 218 - -
Lal5g1502 759 MobiDBLite consensus disorder prediction 230 271 - -
Lal5g1502 759 SMART tpr_5 118 151 IPR019734 GO:0005515
Lal5g1502 759 SMART tpr_5 82 117 IPR019734 GO:0005515
Lal5g1502 759 SMART tpr_5 44 77 IPR019734 GO:0005515
Lal5g1502 759 MobiDBLite consensus disorder prediction 629 656 - -
Lal5g1502 759 SUPERFAMILY TPR-like 41 175 IPR011990 GO:0005515
Lal5g1502 759 SMART PB1_new 285 377 IPR000270 GO:0005515
Lal5g1502 759 SUPERFAMILY TPR-like 490 586 IPR011990 GO:0005515
Lal5g1502 759 MobiDBLite consensus disorder prediction 740 759 - -
Lal5g1502 759 MobiDBLite consensus disorder prediction 416 441 - -
Lal5g1502 759 PANTHER - 1 747 - -
Lal5g1502 759 PANTHER PROTEIN CLMP1 1 747 IPR044517 -
Lal5g1502 759 MobiDBLite consensus disorder prediction 382 396 - -
Lal5g1502 759 Coils Coil 610 630 - -
Lal5g1502 759 MobiDBLite consensus disorder prediction 1 24 - -
Lal5g1502 759 Pfam PB1 domain 287 375 IPR000270 GO:0005515
Lal5g1502 759 Gene3D Tetratricopeptide repeat domain 452 656 IPR011990 GO:0005515
Lal5g1502 759 SUPERFAMILY CAD & PB1 domains 284 354 - -
Lal5g1502 759 MobiDBLite consensus disorder prediction 629 669 - -
Lal5g1502 759 ProSiteProfiles PB1 domain profile. 285 377 IPR000270 GO:0005515
Lal5g1502 759 CDD PB1 288 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1502 Lal-Chr5 17546489 17548768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1502 34 165 Calmodulin-binding Proteins AT3G25230 26.573 5.41e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1502 - - gmx:100786963 1066.22