Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1488 ATGAATGCAGCCAATGACTCAAACAGTACACAATACATGAAACTGAAGAACAAGCTGATTAAGCAGACGAGTGAGATCAGCACTCTCGATGGAACTGATGCATGTGTCATCATTTATGGCCCAAATCAACCTCGACCAGAGATTTGGTCGTCTCGCCTAGGTGTTCAAGGTATGATCAACAAGTTCAAGGCAATGCCCAAGTTGGAACGAACCAGGAATATGTTTAACCGTGAAAGCTTCTTGAAGAAAATGCTCACCAAGACCCTACAGAAGCTGGAGAATCTGAAAAAGGAGAACATGAAAAGGCAAATCGAGCTTTTAATGTTCCAGTGTATGAATTCTGGTAGCATTGTTAACAACAATGCTAGCAACGTTGATATGAATGACCTCGTGTGGGCAATAAACCAGAACCTGAAAGATGTTGATGGGGAAAATGGTGTGGATGAAACCGAACATGGCACAATAATGGCTCTAAATGGAGCAGAAGCTTTGAATGGAGAAGGTGCAAATGTTGGTGTTGCTGGCAAAGGAATGATTGAGGCCAATATGGGTGCCGTGGAGAATGAGGATTTGGCTTCTGACTTTGGCAATGATGGAGGGGATGCAGCGCTTGCACTCGGAGATGATTATCTCTCAAATGAGTCTGAGAATGGTTCTTCAACCCCATGA 669 0.4365 MNAANDSNSTQYMKLKNKLIKQTSEISTLDGTDACVIIYGPNQPRPEIWSSRLGVQGMINKFKAMPKLERTRNMFNRESFLKKMLTKTLQKLENLKKENMKRQIELLMFQCMNSGSIVNNNASNVDMNDLVWAINQNLKDVDGENGVDETEHGTIMALNGAEALNGEGANVGVAGKGMIEANMGAVENEDLASDFGNDGGDAALALGDDYLSNESENGSSTP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1488 222 Gene3D - 5 107 IPR036879 GO:0003677|GO:0046983
Lal5g1488 222 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 8 142 - -
Lal5g1488 222 PANTHER SERUM RESPONSE FACTOR HOMOLOG 8 142 - -
Lal5g1488 222 SUPERFAMILY SRF-like 7 85 IPR036879 GO:0003677|GO:0046983
Lal5g1488 222 Coils Coil 78 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1488 Lal-Chr5 17390208 17390876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1488 7 144 Type I MADS-box Gene Family AT5G27960 37.681 2.37e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Lal5g1488 SRF-TF 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1488 - - lang:109329207 212.231