Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1480 ATGAATGCAGCCAATGACTCAAACAGTACACAATACATGAAACTGAAGAACAAGCTGATTAAGCAGACGAGTGAGATCAGCACTCTCGATGGAACTGATGCATGTGTCATCATTTATGGCCCAAATCAACCTCGACCAGAGATTTGGTCGTCTCGCCTAGGTGTTCAAGGTATGATCAACAAGTTCAAGGCAATGCCCAAGTTGGAACGAACCAGGAATATGTTTAACCGTGAAAGCTTCTTGAAGAAAATGCTCACCAAGACCCTACAGAAGCTGGAGAATCTGAAAAAGGAGAACATGAAAAAGCAAATCGAGCTTTTAATGTTCCAATGTATGAATTCTGGTAGCATTGTTAACAACAATGCTAGCAATGTTGATATGAATGACCTCGTGTGGGCAATAAACCAGAACCTGAAAGATGTTGATGGGGAAAATGGTGTGGATGAAACCGAACATGGCACAATAATGGCTCTAAATGGAGCAGAAGCTTTGAATGGAGAAGGTGCAAATGTTGGTGTTGTTGGCAAAGGAATGATTGAGGCCAATATGGGTGCCGTGGAGAATGAGGATTTGGCTTCTGACTTTGGCAATGATGGAGGGGATGCAGCGCTTGCATTCGGAGATGATTATCTCTCAAATGAGTCTGAGAATGGTTCTTCAACCCCATGA 669 0.429 MNAANDSNSTQYMKLKNKLIKQTSEISTLDGTDACVIIYGPNQPRPEIWSSRLGVQGMINKFKAMPKLERTRNMFNRESFLKKMLTKTLQKLENLKKENMKKQIELLMFQCMNSGSIVNNNASNVDMNDLVWAINQNLKDVDGENGVDETEHGTIMALNGAEALNGEGANVGVVGKGMIEANMGAVENEDLASDFGNDGGDAALAFGDDYLSNESENGSSTP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1480 222 Gene3D - 5 110 IPR036879 GO:0003677|GO:0046983
Lal5g1480 222 PANTHER SERUM RESPONSE FACTOR HOMOLOG 8 142 - -
Lal5g1480 222 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 8 142 - -
Lal5g1480 222 SUPERFAMILY SRF-like 7 85 IPR036879 GO:0003677|GO:0046983
Lal5g1480 222 Coils Coil 78 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1480 Lal-Chr5 17328505 17329173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1480 7 144 Type I MADS-box Gene Family AT5G27960 37.681 2.25e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Lal5g1480 SRF-TF 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1480 - - lang:109329207 205.682