Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1461 ATGATACATTCTTTGCCAATTATTCATAAGGTGGGAGTTCCTCCAAAGAAGACTCTTTTCCAAGAGTTTGAACATAATGTGAAGGAAATATTCTTCTCAGATAACCCTTTAAGCAAATTTAAGGACCAAAATGGATCCAGAAAGTTTATGTTAGGATTGCAAGCAGTTTTCCCTATTTTTGATTGGGGAAGAGGTTACAACCTTAAAACATTCAGAGGTGATTTCATTGCTGGAATTACCATTGCAAGTCTCTGTATTCCTCAGGATATTGCATATTCAAGGCTTGCAAATTTGGATCCCCAATATGCACTATACACCAGCTTTGTGACACCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCGTAGGACCTGTATCTGTGGTATCCCTCTTGCTTGGGACTATGCTTACTGATGAGATTAGTGACTACAAAAGCCATGAATATCTGAGGCTTGCATTTACTGCCACCTTCTTTGCAGGAATTACTCAAATGACACTAGGAGTGTTAAGGCTTGGTTTCTTGATTGACTTCATATCCCATGCTGCCATTGTGGGATTCGTGGCTGGAGCAGCCATTACTATTGCACTGCACCAGCTTCAAGACCTGCTTGGCATACAAAGCTTCACTAAGAAAACCGATGTAGTTTCTGTCATGCGCTCGTGGAACTGGCACACAATTGTGATTGGAGTAGCATTCCTGGTCTTCCTTCTTGTAACCAAATATGTGTGCCTCCTAGTTCATAACTATTGTGTCTATGGCTATGGACAGGCTAAAAAGAAAAGGAAACTCTTTTGGTTGGCTGCAATTGCTCCTATGGTCTCTGTCATACTATCTACAGTTTTTGTGTACATTACAAGGGCAGACAAGAAAGGTGTATCAATTGTGAGACACATTAAGAAAGGTGTGAATCCAATCTCGGCTGGTGAAATTTTTTTCAGTGGCAAATATCTTGGTCCGGGTATTCGGATTGGTATGGTAGCTGGTATGGTAGCACTCACCGAAGCTTTTGCTATTGGGAGAACATTTGCTGCTATAAAAGACTATTCATTGGACGGTAACAAAGAAATGTTGGCTATGGGAACAATGAATGTCATTGGTTCAGTCACATCCTGTTATGTAGCTACAGGATCATTTTCTCGCACAGCGGTGAACTTTATGTCTGGTTGCAAAACTGCTGTATCAAACATTGTTATGTCCATTACAGTATTGTTGACTCTCATACTCATTACACCACTATTCAAGTACACTCCAGATGCTGTGCTTTCTTCTATTATAATAGTTGTGGTGCTAGGCCTTGTGAACGTCGATGTTGTTCTTCTGCTATGGAAGATTGATAAATTCGACTTTGTTGCTTTCATGGGAGCCTTCTTTGGTGTAATCTTCAAAAGTGCTGACATCGGCATTCTAATTGCAGTGGTATTATCTTTTGCTAAAATCCTTTTACAAGTGACAAGGCCAAGAACTGTAGTACTTGGGATGGTAACAGGAACTGGTGTTTACAGGAACATCCAGCAATACCCCGAAGCAACGCAAATTCCAGGCATGCTAATTATCAGGGTCGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGTTTGGCTGTTGAAGATGCCGAAAGGACAGGAAGTGAATTACCAAGAATACAACATCTCATTGTTGAAATGTCGCCTGTTACTGATATTGACACTAGTGGCATTCATGCATTTCAAGGATTATATAATAGCCTTCAGAAAAGAGAAGTACAGCTTGTTTTGTCAAATCCGGGGCCAATTGTAATGGAGAAGCTCCATGCATCAAAGTTAACTGAATTAATTGGTGAAGATAAAATATTTTTATCAGTGGCTGATGCTGTTGCAACTTTTGGTCCAAAGGGTGAAGAATTGTAA 1917 0.4017 MIHSLPIIHKVGVPPKKTLFQEFEHNVKEIFFSDNPLSKFKDQNGSRKFMLGLQAVFPIFDWGRGYNLKTFRGDFIAGITIASLCIPQDIAYSRLANLDPQYALYTSFVTPLVYAFMGSSRDIAVGPVSVVSLLLGTMLTDEISDYKSHEYLRLAFTATFFAGITQMTLGVLRLGFLIDFISHAAIVGFVAGAAITIALHQLQDLLGIQSFTKKTDVVSVMRSWNWHTIVIGVAFLVFLLVTKYVCLLVHNYCVYGYGQAKKKRKLFWLAAIAPMVSVILSTVFVYITRADKKGVSIVRHIKKGVNPISAGEIFFSGKYLGPGIRIGMVAGMVALTEAFAIGRTFAAIKDYSLDGNKEMLAMGTMNVIGSVTSCYVATGSFSRTAVNFMSGCKTAVSNIVMSITVLLTLILITPLFKYTPDAVLSSIIIVVVLGLVNVDVVLLLWKIDKFDFVAFMGAFFGVIFKSADIGILIAVVLSFAKILLQVTRPRTVVLGMVTGTGVYRNIQQYPEATQIPGMLIIRVDSAIYFSNSNYIKERILRCLAVEDAERTGSELPRIQHLIVEMSPVTDIDTSGIHAFQGLYNSLQKREVQLVLSNPGPIVMEKLHASKLTELIGEDKIFLSVADAVATFGPKGEEL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1461 638 Gene3D STAS domain 488 632 IPR036513 -
Lal5g1461 638 ProSiteProfiles STAS domain profile. 508 631 IPR002645 -
Lal5g1461 638 Pfam STAS domain 509 627 IPR002645 -
Lal5g1461 638 CDD STAS_SulP_like_sulfate_transporter 509 624 - -
Lal5g1461 638 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 4 636 - -
Lal5g1461 638 PANTHER SULFATE TRANSPORTER 4 636 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal5g1461 638 SUPERFAMILY SpoIIaa-like 510 632 IPR036513 -
Lal5g1461 638 Pfam Sulfate permease family 71 456 IPR011547 GO:0016021
Lal5g1461 638 TIGRFAM sulP: sulfate permease 58 627 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1461 Lal-Chr5 17113942 17119496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1461 6 634 Inorganic Solute Cotransporters AT1G22150 66.144 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1461 K17470 - gmx:100784124 949.118