Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1432 ATGTACTCCACTCTCTTCTCACCAACCCTCTTCCCCGCCACCACTTCTCTCCGATCTCACCCTCCTCGCTCCTTCACCATCAGAGCCTCCTCTTCCTCCTCCTCCACCACCACCACCACCACCACCACCACCGATTCTCAATCCGCAGCCCCTAAACTCAATAAATACAGTTCCCGCGTCACCGAACCTAAATCCCAGGGTGCCTCTCAGGCCGTCCTCTACGGCGTCGGTCTCACCGATGATGACATGAAAAAGCCTCAAATCGGTGTCTCTTCTGTGTGGTACGAAGGGAACACATGCAATATGCATCTTCTTCAACTCTCTGAAGCTGTTAAAGAAGGTGTTAAAGAAGCTGGCATGATTCCGTTCCGTTTTAATACCATTGGTGTTAGTGACGCTATTTCTATGGGGACTAGAGGCATGTGCTATAGCTTGCAGTCACGTGACATTATTGCTGATAGTATTGAAACTGTTATGAGTGCTCAGTGGTATGATGGCAATATTTCAATACCTGGCTGTGACAAAAATATGCCAGGTACAATCATAGCAATGGGCCGGCTCAACCGACCAAGTATTATGGTTTATGGTGGGACTATAAAGCCTGGTCATTTTCAGGGGAATAGTTTGGATATAGTGGCTGCATTTCAGATTTATGGAGAATATGTGAGTGGATCAGTTAGTGATGAACACAGACAAAATATTATCCGCAACTCGTGCCCTGGTGCTGGGGCTTGTGGTGGAATGTATACTGCTAATACCATGGCCTCTGCAATAGAAGCTATGGGAATGTCTCTCCCCTATAGCTCATCTACACCTGCTGAGGATTCACTAAAGTTGGATGAATGTCGTTTAGCTGGGAAATATCTTCTTGAGTTATTGAAGATGGACTTGAAGCCACGAGATATTATCACTCGTAAATCACTACGTAACGCAATGGTTATGGTTATGGCACTTGGTGGGTCTACCAATGCTGTGTTACATTTTATTGCTATTGCCAAGTCTGTTGGCATCGATTTGACACTAGATGATTTCCAGAAGGTCAGCGACGAGGTTCCTTTTCTTGCAGATCTTAAGCCTAGTGGAAAATATGTCATGGAAGATCTTCATAAGATTGGAGGCACTCCTGCCGTTATCCGCTATCTTCTTGAACAAGGCTTTCTAGATGGGGACTGCATTACCGTCACTGGGAAGACACTAGCTGAAAATGCAGAACTTTTCCCTCCTTTGTCTAAAGGACAGGACATAATAAGGCCAATAGAAAATCCCATCAAGAAGACAGCACACATTCAAATACTATATGGGAATGTTGCACCACAGGGCTCTGTCGCTAAAATTACTGGAAAAGAGGGGCTGTACTTCTCTGGTCCAGCACTTGTTTTTGAAGGAGAGGAGGCAATGATTGCAGCCATTTCAGAGGATCCTCTGAGTTTTAAGGGGAAAGTGGCTGTAATAAGGGGAGAGGGACCTAAGGGTGGTCCGGGCATGCCTGAGATGTTAACACCAACAAGTGCAATAATGGGTGCAGGTCTTGGAAAGGATGTTGCTCTATTGACTGATGGAAGATTTTCTGGAGGTTCACACGGGTTTGTCGTTGGCCACATATGCCCTGAAGCACAGGTTGTGACTGTTGAAGATAATGCACTGATGCTCAACTGGAAATTGGAATTATGTGCAAGTTTAACCCTCTTACTAGAAAAGAAGGAAGGTGGTCCAATTGGATTGATTCAAAATGGAGATGTTATCAACATTGATTGTCAGAAGAGGAGAATTGATGTTTTGTTGACAGATGAGGAGTTGGAAGCACGCAGGAAGAGATGGTCTGCTCCTCCATACAAAGCTAACCAAGGAGTTTTGTACAAGGCAATGGAGGGAAGTGAAAGGCTTCAGAGCCATGAAATACACTTACGAATAGAGATGACAAGTTTTGGGTGGCTGGCTTGCAGAGCAAAATCTGATTATATCCCTCAGTGCCTTTTTAATGAGGGAGATCAAGCTTCTATCATAGGAGGAGTGATAGAATTCATCAAGGAGTTACACCATGTTCATCAAGCTTTGGAGTCCCAGAAAAGAAGAAAGAGTCTAAGCCCTAGCCCCATTCCTAGTCCAAAAACACTGCAATCAACAGTTATTCAACTTAATAATTCCTCCAGAATTGAGACTGATCAATCTTTTAAGGAACTTGGAGCAAGTTGCAACTCTTCAACAGCTGATGTAGAAGTGAAAATTTTGGGTTCAAATGTGATTCTGAAAGTGATTTCCCACAGAATTCTGGGTCAAGTTGCAAAGATTATAGGTGTTTTGGAAGGTTTTTCATTTGAAGTTCTTCATCTGAATATCAGTAGCATGGAGGATACTGTCCTATACCACTTTGTTGTTAAGATAGGGCTGGAATGTCAACTAAGTCTAGAGGAACTTGCAATGGAAGTACAACGAAGCTTCAGCTCTCAAGCAATTACTGTGCTGTGA 2466 0.4384 MYSTLFSPTLFPATTSLRSHPPRSFTIRASSSSSSTTTTTTTTTDSQSAAPKLNKYSSRVTEPKSQGASQAVLYGVGLTDDDMKKPQIGVSSVWYEGNTCNMHLLQLSEAVKEGVKEAGMIPFRFNTIGVSDAISMGTRGMCYSLQSRDIIADSIETVMSAQWYDGNISIPGCDKNMPGTIIAMGRLNRPSIMVYGGTIKPGHFQGNSLDIVAAFQIYGEYVSGSVSDEHRQNIIRNSCPGAGACGGMYTANTMASAIEAMGMSLPYSSSTPAEDSLKLDECRLAGKYLLELLKMDLKPRDIITRKSLRNAMVMVMALGGSTNAVLHFIAIAKSVGIDLTLDDFQKVSDEVPFLADLKPSGKYVMEDLHKIGGTPAVIRYLLEQGFLDGDCITVTGKTLAENAELFPPLSKGQDIIRPIENPIKKTAHIQILYGNVAPQGSVAKITGKEGLYFSGPALVFEGEEAMIAAISEDPLSFKGKVAVIRGEGPKGGPGMPEMLTPTSAIMGAGLGKDVALLTDGRFSGGSHGFVVGHICPEAQVVTVEDNALMLNWKLELCASLTLLLEKKEGGPIGLIQNGDVINIDCQKRRIDVLLTDEELEARRKRWSAPPYKANQGVLYKAMEGSERLQSHEIHLRIEMTSFGWLACRAKSDYIPQCLFNEGDQASIIGGVIEFIKELHHVHQALESQKRRKSLSPSPIPSPKTLQSTVIQLNNSSRIETDQSFKELGASCNSSTADVEVKILGSNVILKVISHRILGQVAKIIGVLEGFSFEVLHLNISSMEDTVLYHFVVKIGLECQLSLEELAMEVQRSFSSQAITVL 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1432 821 SUPERFAMILY IlvD/EDD N-terminal domain-like 38 426 IPR037237 -
Lal5g1432 821 SUPERFAMILY LeuD/IlvD-like 429 619 - -
Lal5g1432 821 ProSitePatterns Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 173 183 IPR020558 GO:0003824
Lal5g1432 821 PANTHER DIHYDROXY-ACID DEHYDRATASE DAD 1 539 - -
Lal5g1432 821 PANTHER DIHYDROXY-ACID DEHYDRATASE DAD 565 623 - -
Lal5g1432 821 TIGRFAM ilvD: dihydroxy-acid dehydratase 69 539 IPR004404 GO:0004160|GO:0009082
Lal5g1432 821 MobiDBLite consensus disorder prediction 17 64 - -
Lal5g1432 821 PANTHER BNAA01G23200D PROTEIN 565 623 - -
Lal5g1432 821 PANTHER BNAA01G23200D PROTEIN 1 539 - -
Lal5g1432 821 Pfam Dehydratase family 565 620 IPR000581 GO:0016836
Lal5g1432 821 Pfam Dehydratase family 85 540 IPR000581 GO:0016836
Lal5g1432 821 Gene3D - 429 544 IPR042096 -
Lal5g1432 821 Gene3D - 556 606 IPR042096 -
Lal5g1432 821 ProSitePatterns Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 515 526 IPR020558 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1432 Lal-Chr5 16906717 16917715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1432 657 820 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 57.803 3.56e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1432 K01687 - gmx:100806689 993.416