Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1405 ATGCATCAAAGGTCTCTACTATTCAACTCTCTTACCTCTCAATTTTTACACAACAGTTTGCTTGGGCGTAGCACTCACTGTCAGGTTTTGGAATCTGGATTTTTGATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAGGGATATTGCTGAAAAGAAGATGGAAACCAAAGATTTTGCAGGGGCTCGTAAAGTTGCCCTTAAAGCTAAGCAACTATACCCTGATTTGGAGAGTATCAGTCAAATGCTTATTGTTTGTGATGTGCATTGCGCTGCTGAGCATAAGTTGAATGGCAATGAGATGGACTGGTATAAAATTCTTCAAATTGAGTTGACGGCTAATGATGCAACAATTAAGAAACAATACAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACAAGTTTTCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTCTTGGATAGTTTAAGCCGGTCTAGGTTTGATGCCATGTATCGCAGGGTAACAATGAACAAGAATGCTATGCCATCTTATAATCTGCAGAAGGTTCCGACGAATTTTAGTTCCTCGATGCAAAGGAATGTCAGGCCGACATTTACAAACTTGAATCCTCAGAAGTTCCAGCAGCCTAGGCAGTCATCTCAGCAGGGAGTGCTTAATGGTGGCAGCGCTACTTTTTGGACTGCCTGCACTTTTTGTTCCTATAGATACGAGTATTACAGGGAAGTTTTAAATAGAGCTCTGCGCTGTCAGAATTGCAATAAGCCCTTCATTGCATACGATGTGGATATGAAAGGTACAACTCCAGCAACTAATTCAACTCAGCAAGCTTTTGGCCAGCAGAAATATGGTGTGAATCATGGTGCTTCCAAGGCAGGTGCTGAATCTCAAGGTAATTTCAACAATTTCAAGACCAATGCACAGCCTTCTGGAAAAAAAGGCCCTACTATTGATGCCTCTAGAAAGCCAAATAGAAAGAGAAAGAATCAGGGATCAGAATCCACGGAAAGTTCTGATTCTGAAGTTGTGTTTGCTGATAATGATAGTTTTGATGGTGTAGAAAAGTTTTCATCAAATAGAGACGAGCATCGGCGTAGATCTACACGGCAAAAGCATCAAGTTTCCTACAAGGAGAATGTAAGTGATGATGATGATGATGATGACAATGCATTAAAACCTTCGAAAAGGCGCAAGGGGAGTGGCTCCTCATCTGATGCTGATGAAATTTGTGGGGATGCAGCTAAAATGAATTACCAGAAAGGTTCAGTTTCTGATCTGAAAGATGATCATAAAGAGTTCAAGCGTAAACATTCTGAAGAGAGCTTAGTAAATGGAGATGATGAAATTAAAGAGGCAAGGGGTAAAGAAGCAGGGGACAACTCAAAGACTGATGAAGCTTCAGAGAGTACTTCTTTCGCCTTTCCTGATCCCGAGTTCAACGACTTTGACAAGGACAAAAAAGAAGAGTGTTTTGAGGCTGGGCAGATTTGGGCTCTCTTTGATACAGCAGATGGCATGCCTAGATTCTATGCTATAATCAGAAAAGTTTTCTCTCATGGATTCAAGGTGCGGCTAACATGGTTAGAACCCGATCCAGATGAAGATGATGAAATCCACTGGTTTAACGAGCAATTGCCAATTGCTTGTGGGAAATTTAAACTAGGTGCCACTGACACCACTGAAGATCATTTGATGTTCTCTCATTTGCATTTTTTTGAAAAGATTAACCGCTCTACCTTTAAAGTGTATCCGAGAAAGTGTGAAACTTGGGCTCTTTTTAAAAATTGGGATATCAAATGGTACATGGATGCCAAATCTCATCAGCAGTATGATTATGAATTTGTTGAAATCTTGTCAGATTATGTTGAAGGTGAAGGAGTAGTTGTTGCATACTTGGCTAAGTTGAAAGATTTTGTGAGCCTCTTCTCTCGGATTATGAAGGAAGGCGAACACACAGTTCAAATTCCATCTTCTGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGTCTGGTGAGGAAAGAGTAGGTGTTCCTGTAGGATCTTATGAACTTGATCCTGCATCCTTGCCTCAGAATCTGGAAGAGATCACCATTCCTGAACATGTGGAACTGAAGGTTGGTCCTAGTCCATCGGTTCGAATGAATACAAAACCTGACGGAGTCTACTTCCAAGGTTAA 2190 0.4105 MHQRSLLFNSLTSQFLHNSLLGRSTHCQVLESGFLMDCNKEEALRARDIAEKKMETKDFAGARKVALKAKQLYPDLESISQMLIVCDVHCAAEHKLNGNEMDWYKILQIELTANDATIKKQYRKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDSLSRSRFDAMYRRVTMNKNAMPSYNLQKVPTNFSSSMQRNVRPTFTNLNPQKFQQPRQSSQQGVLNGGSATFWTACTFCSYRYEYYREVLNRALRCQNCNKPFIAYDVDMKGTTPATNSTQQAFGQQKYGVNHGASKAGAESQGNFNNFKTNAQPSGKKGPTIDASRKPNRKRKNQGSESTESSDSEVVFADNDSFDGVEKFSSNRDEHRRRSTRQKHQVSYKENVSDDDDDDDNALKPSKRRKGSGSSSDADEICGDAAKMNYQKGSVSDLKDDHKEFKRKHSEESLVNGDDEIKEARGKEAGDNSKTDEASESTSFAFPDPEFNDFDKDKKEECFEAGQIWALFDTADGMPRFYAIIRKVFSHGFKVRLTWLEPDPDEDDEIHWFNEQLPIACGKFKLGATDTTEDHLMFSHLHFFEKINRSTFKVYPRKCETWALFKNWDIKWYMDAKSHQQYDYEFVEILSDYVEGEGVVVAYLAKLKDFVSLFSRIMKEGEHTVQIPSSELFRFSHRVPSFKMSGEERVGVPVGSYELDPASLPQNLEEITIPEHVELKVGPSPSVRMNTKPDGVYFQG 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1405 729 SMART dnaj_3 101 158 IPR001623 -
Lal5g1405 729 Pfam DnaJ domain 102 163 IPR001623 -
Lal5g1405 729 MobiDBLite consensus disorder prediction 423 464 - -
Lal5g1405 729 MobiDBLite consensus disorder prediction 293 314 - -
Lal5g1405 729 PANTHER - 36 721 - -
Lal5g1405 729 SUPERFAMILY Chaperone J-domain 99 167 IPR036869 -
Lal5g1405 729 CDD DnaJ 102 155 IPR001623 -
Lal5g1405 729 MobiDBLite consensus disorder prediction 319 335 - -
Lal5g1405 729 Pfam Domain of unknown function (DUF3444) 470 677 IPR024593 -
Lal5g1405 729 Gene3D DnaJ domain 88 186 IPR036869 -
Lal5g1405 729 MobiDBLite consensus disorder prediction 389 404 - -
Lal5g1405 729 PRINTS DnaJ domain signature 104 122 IPR001623 -
Lal5g1405 729 PRINTS DnaJ domain signature 122 137 IPR001623 -
Lal5g1405 729 PRINTS DnaJ domain signature 138 158 IPR001623 -
Lal5g1405 729 ProSiteProfiles dnaJ domain profile. 102 166 IPR001623 -
Lal5g1405 729 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 36 721 - -
Lal5g1405 729 MobiDBLite consensus disorder prediction 421 475 - -
Lal5g1405 729 MobiDBLite consensus disorder prediction 289 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1405 Lal-Chr5 16688989 16692935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1405 10 368 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.380 4.41e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1405 - - lang:109334336 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1405 5 16688989 16692935 Lal11g0480 11 3734027 3737635 LSH
Lal7g1445 7 19317987 19321498 Lal5g1405 5 16688989 16692935 PCT
Lal5g1405 5 16688989 16692935 Lal7g1445 7 19317987 19321498 PCT