Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1386 ATGGCCGACGACGCCAAAAACAGAGGAATCTATGACGCCGACCACCACCATAACCAACCTTATTATGGCACCTTTCAAGGCGTCGCCAATTACTATCCTCCTCATAACCCACCGCCCCATGCCGTTGTTGGTTTCCCTCAACCACTTCCACCGTCGCAACCACCACCCGTTTCTTATGATGCCCCCCGCTATTATTACCAAGGCTACCACTCTCTTCCAGTTTATGCTGTTGCTGATGGTAGGCCTCTAAGAGAACATCGTCTTCCTTGCTGTGGACTTGGTTTGGGTTGGCTCTTGTTTTTGACTGGTTTCATTCTTGGTGGCGTTCCATGGTACATCGGAACTTTCATTCTACTATGCATACAAATGGATTACCGAGAAAAGCCTGGATTAATTGCATGCACAGTTGCTTCCTTCATTGCTGTGATAGCTGTTACCTTTGGTGTCACACAACAAGATCATGATTGGTTAAGTTTTACTTGA 483 0.4679 MADDAKNRGIYDADHHHNQPYYGTFQGVANYYPPHNPPPHAVVGFPQPLPPSQPPPVSYDAPRYYYQGYHSLPVYAVADGRPLREHRLPCCGLGLGWLLFLTGFILGGVPWYIGTFILLCIQMDYREKPGLIACTVASFIAVIAVTFGVTQQDHDWLSFT 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1386 160 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE PROTEIN 1 156 - -
Lal5g1386 160 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 156 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1386 Lal-Chr5 16528900 16533010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1386 15 156 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.158 1.65e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1386 - - csin:114281039 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1386 5 16528900 16533010 Lal5g1386 5 16528900 16533010 ECH