Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1367 ATGAGGAGAAATTGCAAATTGGAACTTTCACTTTTCCCTTCCTATAGTTCTGACCCCATGAATGGAGCTTCTAATGGGGACTCAAAGACCGAACAACTCCACCACCACCAAGAATGCCACCAGCAGAAGGAACAGCAGAACACACTTACCATTTTCTATGATGGAAAGATCTGCGTTTCTGATGTCACAGAGCTTCAGGCTAGATCAATCTTAATGCTTGCAAATAAAAAAATGGAGGAAAAAGTGAAAACAGGAAGTAGGTTAGAGCCATCTACACCAACAGTAGTGGAATCTCACCAACCATTGTATAGTCCAGCCACTCCTCTTTCTATGAAAAGATCGTTGCAAAGGTTCCTCCACAAAAGAAAGATTAGGAAACAAGAAGCTTCTCCATATAATCACTTCTCAAATTAA 414 0.4058 MRRNCKLELSLFPSYSSDPMNGASNGDSKTEQLHHHQECHQQKEQQNTLTIFYDGKICVSDVTELQARSILMLANKKMEEKVKTGSRLEPSTPTVVESHQPLYSPATPLSMKRSLQRFLHKRKIRKQEASPYNHFSN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1367 137 SMART tify_2 42 76 IPR010399 -
Lal5g1367 137 PANTHER - 1 134 - -
Lal5g1367 137 MobiDBLite consensus disorder prediction 80 109 - -
Lal5g1367 137 Pfam Jas motif 112 132 IPR018467 -
Lal5g1367 137 ProSiteProfiles Tify domain profile. 42 76 IPR010399 -
Lal5g1367 137 Pfam tify domain 44 75 IPR010399 -
Lal5g1367 137 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 134 IPR040390 -
Lal5g1367 137 MobiDBLite consensus disorder prediction 87 109 - -
Lal5g1367 137 MobiDBLite consensus disorder prediction 16 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1367 Lal-Chr5 16323732 16326983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1367 1 132 Tify Gene Family AT1G30135 43.284 2.83e-23 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal5g1367 tify 8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1367 - - gmx:100803886 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1367 5 16323732 16326983 Lal5g1367 5 16323732 16326983 ECH
Lal5g1367 5 16323732 16326983 Lal3g0362 3 2449037 2451322 LSH