Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1361 ATGGAGGAGGATGATGAGAATCAAAGACATGCATGCAAGTTTGCAAGGATTGGAAGTAAAACAAAAGAGTCTAAGAATTGTTCAAGAATTGTGAGGGTATCTAAAGCATGTTGTGGAAAAGATAGGCATAGTAAGGTAATGACTTCAAAGGGTTTAAGAGACAGAAGAGTTAGGCTTTCTGTGACCACTGCTATTGAATTCTATGACCTTCAAGATAGACTTGGTTATGAGCAACCTAGTAAAGCTGTTGAATGGTTAATCAATGCTGCTTCTGATGCAATTTCAGAACTCCCTTCTCTTAACACCACTTTCCCTGATACCCTTAATCAACCAAATGATGAGAAAATGCCATGTTTTGATGGAGACACAAACAAATATAACCAAAACCAAAACCAAAACCAAAACCTTTGTTTGTCAAAATCTGCTTGTAGCAGCACTTCTGAGACAAGCAAAGGTTCTACCTTGTCTTTATCAAGGTCTGAGATTCGTGTAAAGGCAAGGGAGAGAGCAAGGGAAAGAGCAGCAAAGGATAAAGAGAAAGAAAATGAGTCATTTGACATTGTAACAAATCATCATCACAATGTGACTCAAAATGCTTCTTTCACTGAGCTTCTAACTGGTGGGGTTGGTAATGTTGCTACAACTACAACAAGTGCTACTGTTTGTGATGATGAGACTAATCTATTCAACAATAAGGCTAAGCAATGGTCACCTATGGTCATGGATTACTTCAACTCATCAGGACTTTCTTCAAGAAATGTTTCACCATTTGGTGCTGAAAACCACTCAGATCAGCTTCAACATTTCTCTTTCATCCCTGACCATAATTTCATACCTTCTTCACAGTCATGTGGAAGTGACTACAATCTCAACTTCACAATTTCTCCTAGCCTTTCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCTCTGTCTCATATTATGCAGAGGTTTAGTTCTTCACATATAGATGGATCAACCAATAATCTACCTTTATTCATAGGAGGAGCTTCTCATTCAGCTTCTGCTGATTCAACCATGGATACTAGTATTAACCAACAAGAACAACTTCAGTTCTCAACTGAATTCTCTTCATTGGCCTTTTTAATGGCAGGAGCAGCAACTTATGTCCCAAGCTTGCATTCTTCAAAACAGAGGGTATATGTTGTTTTCATCAAGTATTGGTATTTCTTATATCATTTTGACTCATTTCATTACATTGAGTACTTGGTTATTTAA 1239 0.3769 MEEDDENQRHACKFARIGSKTKESKNCSRIVRVSKACCGKDRHSKVMTSKGLRDRRVRLSVTTAIEFYDLQDRLGYEQPSKAVEWLINAASDAISELPSLNTTFPDTLNQPNDEKMPCFDGDTNKYNQNQNQNQNLCLSKSACSSTSETSKGSTLSLSRSEIRVKARERARERAAKDKEKENESFDIVTNHHHNVTQNASFTELLTGGVGNVATTTTSATVCDDETNLFNNKAKQWSPMVMDYFNSSGLSSRNVSPFGAENHSDQLQHFSFIPDHNFIPSSQSCGSDYNLNFTISPSLSGYNRGTLQSNSLSHIMQRFSSSHIDGSTNNLPLFIGGASHSASADSTMDTSINQQEQLQFSTEFSSLAFLMAGAATYVPSLHSSKQRVYVVFIKYWYFLYHFDSFHYIEYLVI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1361 412 PANTHER TRANSCRIPTION FACTOR TCP24 3 364 - -
Lal5g1361 412 ProSiteProfiles TCP domain profile. 39 97 IPR017887 -
Lal5g1361 412 Pfam TCP family transcription factor 39 180 IPR017887 -
Lal5g1361 412 ProSiteProfiles R domain profile. 160 180 IPR017888 -
Lal5g1361 412 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 364 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1361 Lal-Chr5 16282597 16286390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1361 26 337 TCP Transcription Factor Family AT4G18390 45.658 3.55e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal5g1361 TCP 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1361 - - lang:109333568 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1361 5 16282597 16286390 Lal5g1361 5 16282597 16286390 ECH