Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1358 ATGTTAGAAAGTAGTTGTGACCGTGATTCTTGTCTCAGCTTAGAAACCCTTAATTCCTCAACCCAACGAACTTCAATGAGCAGCGAAAGCATTTGCAGCACCAGCTTCAGTCGTCTCTCTTTTGATCTCATTCCTACTTCCCCTCACTCCAACCTTTCCATTAAACCTCATCGTTCCTCCGACTTCGCTTACTCCGCCATTCGCCGCAACTCCGCCCTCTCCTTCCGCCACTTCCACCTCCTCCGTCGTATCGGCTCCGGCGACATCGGCACTGTCTACCTCTGCCGACTCCGCACCACCACTGCCGATGATGATGAGTTCGATAACACCATCACTGACGGCGACTCCGCGTGTTTCTATGCGATGAAGGTGGTGGATAAAGAAGCTGTTGCTTTGAAGAAAAAAGCGCAGAGAGCTGAAATGGAGAGGAAGATTTTGAAGAAGCTGGATCATCCTTTTCTTCCTACGCTTTACGCTGAGTTCGAAGCATCGCATTTTTCTTGCATTGTAATGGAGTTTTGTTCCGGCGGTGATTTACACTCGCTCCGTCATAAGCTTCCTCATAAACGCTTCCCTCTTAACTCTGCAAGATTCTATGCAGCTGAGGTATTAGTGGCATTAGAGTACCTTCATATGTTGGGAATCATTTATAGAGATCTAAAGCCTGAAAACGTGTTAGTCAGATCCGACGGTCACATCATGCTATCAGATTTTGATCTTTCACTCTGTTCTGATGCAATCCCAGCCGTTGAATCACCTGATGATGATCCACCCTTCACACATTCCACTCGCTCCAATTCTAATCCATTATTCTCGTGTCTCTGGAAGCGACTCTTCCGGTCCAGGAAGGTTCAAACGGTTCAAGCAAACCGGTTATTTGTAGCTGAACCGGTTGGTGCAAGGTCATGTTCTTTTGTAGGGACTCATGAATACGTGTCACCGGAAGTGGCTTCTGGTAACTCACACGGCAACGCCGTTGACTGGTGGTCCTTCGGAATCTTCATGTATGAGCTTATATACGGTCGTACTCCGTTTGCGGGACCATCAAATGAAGTTACACTGCGCAACATCATAAAGAAGCCTCTCACTTTTCCTACATCTACGCTCTCAACCTCGCTTGAGCGACACGCGCGGGACCTAATTTCAGCGTTGCTTAATAAAGACCCGAACCGCAGGCTCGGGTCGAAGCGTGGCGCTGCTGACGTCAAGAACCATCGTTTCTTTCAAGGGCTTAACCTTGCGCTTATTAGAATGCTCGCTCCGCCGGAGGTGCCGTGCCTGAGAAGGAATAAAACGACGCCCTTCGTTCCTGTTACGGGGAATAGTAACGGAAGTAGTAGTAGGTTACTGCCAACGGCGTCGTTTGATTACTTTTGA 1377 0.4844 MLESSCDRDSCLSLETLNSSTQRTSMSSESICSTSFSRLSFDLIPTSPHSNLSIKPHRSSDFAYSAIRRNSALSFRHFHLLRRIGSGDIGTVYLCRLRTTTADDDEFDNTITDGDSACFYAMKVVDKEAVALKKKAQRAEMERKILKKLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKLPHKRFPLNSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPDDDPPFTHSTRSNSNPLFSCLWKRLFRSRKVQTVQANRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFMYELIYGRTPFAGPSNEVTLRNIIKKPLTFPTSTLSTSLERHARDLISALLNKDPNRRLGSKRGAADVKNHRFFQGLNLALIRMLAPPEVPCLRRNKTTPFVPVTGNSNGSSSRLLPTASFDYF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1358 458 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 2 458 - -
Lal5g1358 458 Gene3D Transferase(Phosphotransferase) domain 1 301 426 - -
Lal5g1358 458 PANTHER FLIPPASE KINASE 1-RELATED 2 458 - -
Lal5g1358 458 SUPERFAMILY Protein kinase-like (PK-like) 55 432 IPR011009 -
Lal5g1358 458 Coils Coil 122 149 - -
Lal5g1358 458 Gene3D Phosphorylase Kinase; domain 1 77 173 - -
Lal5g1358 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lal5g1358 458 ProSiteProfiles Protein kinase domain profile. 78 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1358 458 Gene3D Transferase(Phosphotransferase) domain 1 174 241 - -
Lal5g1358 458 SMART serkin_6 78 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1358 458 Pfam Protein kinase domain 302 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1358 458 Pfam Protein kinase domain 115 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1358 458 CDD STKc_phototropin_like 76 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1358 Lal-Chr5 16251712 16253707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1358 7 458 AGC Kinase Gene Family AT2G34650 62.582 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal5g1358 Pkinase 4.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1358 - - gmx:100795536 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1358 5 16251712 16253707 Lal3g0369 3 2516665 2518569 LSH