Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1349 ATGCCTAAGCAAATCCATGAGATTAAGGATTTCCTTCTCACTGCTAGAAGGAAAGATGCTAGGTCAGTGAAAATCAAGAGAAGCAGAGATGTTTTTAAGTTCAAGGTTCGTTGCTCCAAGTATCTCTACACGCTTAGTGTATTTGATACTGAGAAAGCTGATAAACTGAAGCAATCACTTCCTCCGGGTTTGAGTGTTCAAGACTTGTAG 210 0.4 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVFKFKVRCSKYLYTLSVFDTEKADKLKQSLPPGLSVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1349 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lal5g1349 69 PANTHER - 1 69 - -
Lal5g1349 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lal5g1349 69 Gene3D - 1 69 IPR038464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1349 Lal-Chr5 16164670 16166150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1349 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.304 4.58e-42 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1349 K02923 - cit:102619410 132.494