Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1348 ATGTCATGGTTTAGTTCAAGTTATCATGCTATCTTACTTCCCCTTTTTCTGTTATTACAGTTTTCATATCAACTTGCAACTTGTGGCTCTATAGTAAAGTCCCTTCCTGGGTTTCATGGACCCCTTCCTTTTCTACTAGAAACTGGATATGTAGGAGTGGGTGAAAGAGAGGATGTGCAAGTTTTCTACTATTTCATTCAATCAGAGAATAATCCAAAGGAAGATCCTTTATTAATTTGGCTCACAGGAGGTCCTGGTTGCTCTGCTTTCTCTGGCCTTGTTCTTGAAATAGGTCCACTTGCATTTAAAATTGATGAATATAATGGGAGCCTGCCTAATTTGATATTGAGACCACAATCATGGACAAAGGTAAGTAGCATTATATTTGTAGATATGCCTGTTAATACAGGCTTCACATATGCAAGAACAGAATCTGCTAGTGAGAGAAGTGATTGGAATCTAGTTCATCAAACCCATGAATTCCTTAGGAAGTGGCTAATTGATCATCCAGAATTTCTCTCTAATGAAGTTTACATTGGTGGTGACTCATATTCTGGTATTACTGTTCCAGTTATTGTTCAAGAAATTGCACAAGGAAATGAGGAAGGGCTCCAACCACTGATAAATCTCCGGGGATACCTGCTAGGGAATGCTTTAACAACTCGAACAGAAAGAAACTACGCGATTCCCTTCGCTCACGGAATGGGACTTATTTCTGATGAACTGCATGAGTCACTGCAAAAAAATTGCAAAGGAGATTATATAGAAGCTGACACTAGAAATGCGCTATGTAGAAGAGACATCAAGTCCTTTGATGAGACTACATCAGGACTTAATATGGCTCAAATTTTGGAGCCATTATGTGAGTGGTTGTCGCCGAAACCAATAGAAGCTTCTTCGAGGAGATCTGTAACTGAGAAATTTTCTTCGAAGCTCCACAATGCTCACCTCACTTTGCCTCCCTTAAGCTGTCAAAGTTATGCATACTATCTATGTGAATATTGGGCCAATGACGAAAATGTTCGGGATGCACTGCACATAAGAAAGGGAAGTATAGGGAAATGGTCTCGTTGTACCTTTGATATTCCTATGAAGATGGATATCGCTAGCAGCTTTCAATATCATGCAAATCTTAGTAGAAAAGGCTATCGTTCGCTGATATACAATGGCGATCATGACATGGGGGTTCCCTTCTCGGCGTCTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTTGATGATTGGAGGCAATGGCATACAAATGGCCAAGTTGCAGGATATACAAGAACTTACTCCAATCTGATGACATTTGCAACTGGTGGAAGCCACACAGCTCCTGAGTTAAAGCCAGATGAATGCTTTGCCATGTTCAAAAGGTGGATATCTAAGGAAGCTTTGTAG 1404 0.4017 MSWFSSSYHAILLPLFLLLQFSYQLATCGSIVKSLPGFHGPLPFLLETGYVGVGEREDVQVFYYFIQSENNPKEDPLLIWLTGGPGCSAFSGLVLEIGPLAFKIDEYNGSLPNLILRPQSWTKVSSIIFVDMPVNTGFTYARTESASERSDWNLVHQTHEFLRKWLIDHPEFLSNEVYIGGDSYSGITVPVIVQEIAQGNEEGLQPLINLRGYLLGNALTTRTERNYAIPFAHGMGLISDELHESLQKNCKGDYIEADTRNALCRRDIKSFDETTSGLNMAQILEPLCEWLSPKPIEASSRRSVTEKFSSKLHNAHLTLPPLSCQSYAYYLCEYWANDENVRDALHIRKGSIGKWSRCTFDIPMKMDIASSFQYHANLSRKGYRSLIYNGDHDMGVPFSASQAWIRSLNYSIVDDWRQWHTNGQVAGYTRTYSNLMTFATGGSHTAPELKPDECFAMFKRWISKEAL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1348 467 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 10 465 - -
Lal5g1348 467 Gene3D alpha/beta hydrolase 28 294 IPR029058 -
Lal5g1348 467 SUPERFAMILY alpha/beta-Hydrolases 32 464 IPR029058 -
Lal5g1348 467 Pfam Serine carboxypeptidase 36 463 IPR001563 GO:0004185|GO:0006508
Lal5g1348 467 Gene3D - 323 466 - -
Lal5g1348 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Lal5g1348 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Lal5g1348 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Lal5g1348 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 465 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1348 Lal-Chr5 16158160 16163623 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1348 26 55 Calmodulin-binding Proteins AT2G22960 70.000 3.13e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1348 K16296 - gmx:100792006 736.873