Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1344 ATGGTAGTTGAAGAAACCCCAAAATCAACCATCACTGATGATCAAATCATCGCAAACCCTAACAACAACAACAACGACAACGACGGTGACGCTGATCATGAGGACGGAGAGATCCTCGACGGCGATGAATCCGCCACATCGAAACCTTCCTCCGCCGCCGACCCTCACCCGTTCGAGAATTCATGGACCTTCTGGTTCGATAATCCTTCCGCTAAGTCCAAACAAGTTGCTTGGGGAAGCTCCATAAGAAACATCTACACTTTCTCCACTGCTGAAGAGTTTTGGAGCATTTACAATAACATTCATCATCCAAGCAAGTTGTCTACGGGAGCAGATTTCCATTGTTTCAAGCATAAGATTGAGCCAAAATGGGAGGACCCTATTTGTGCTAATGGGGGCAAATGGACTGCAACCTTTCCTAAAGGGAAATCTGATACTAGTTGGTTATATACGTTGTTGGCAATGATTGGAGAGCAATTTGATCATGGAGATGAAATTTGCGGAGCCGTTGTGAATGTCCGAAGTAGGCAGGATAAAATTTCTATTTGGACTAAGAATGCTGCCAATGAAGCTGCTCAGATGAGCATTGGAAAACAGTGGAAGGAGTTTCTCGATTACAATGATACCATTGGCTTTATATTTCATGAGGATGCAAAGAAGAATGACAGAGCTTCTAACAAAAATAAATACGTCATATGA 699 0.4306 MVVEETPKSTITDDQIIANPNNNNNDNDGDADHEDGEILDGDESATSKPSSAADPHPFENSWTFWFDNPSAKSKQVAWGSSIRNIYTFSTAEEFWSIYNNIHHPSKLSTGADFHCFKHKIEPKWEDPICANGGKWTATFPKGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRSRQDKISIWTKNAANEAAQMSIGKQWKEFLDYNDTIGFIFHEDAKKNDRASNKNKYVI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1344 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 231 - -
Lal5g1344 232 Gene3D RNA Cap, Translation Initiation Factor Eif4e 47 232 IPR023398 -
Lal5g1344 232 MobiDBLite consensus disorder prediction 8 26 - -
Lal5g1344 232 ProSitePatterns Eukaryotic initiation factor 4E signature. 112 135 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lal5g1344 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 231 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lal5g1344 232 MobiDBLite consensus disorder prediction 1 55 - -
Lal5g1344 232 Pfam Eukaryotic initiation factor 4E 57 208 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lal5g1344 232 SUPERFAMILY eIF4e-like 27 224 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1344 Lal-Chr5 16109155 16111576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1344 1 231 Eukaryotic Initiation Factors Gene Family AT4G18040 65.690 1.19e-110 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1344 K03259 - gmx:100499636 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1344 5 16109155 16111576 Lal5g1344 5 16109155 16111576 ECH
Lal5g1344 5 16109155 16111576 Lal3g0383 3 2610099 2612266 LSH