Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1334 ATGGCTGAACCAATCATATCATGGAAACCTGTGCCAGCGTGGCAGAGGCAGCCAATCAGTGCCTCGAGGAAATTAAGTGTCAAAGCAACTATTGAAAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTGGATCTGCTTCTGAGGCTAATACTCAGCATTATTTCATATATATTCTCCAGTTTTACCAGCAAGAAGCAGACAAATTGCGTGTGCAAATTAGTAACCTGCAAAATAACAACAGGCAAGTTGAATTAACATTTGTTGCACTAGGACAAAAAAAAGTTCAGCTAATGATGGGTGAGTCTTTGGGCTCTATGAACGCTAAGGATCTCAAAAATCTTGAGACTAAATTAGAGAAAGGAATTAGCAAGATCCGTTCCAAAAAGAATGAGCTACTATTTGCTGAGATTGAGTACATGCAGAAAAGGGAGTTAGACTTGTACAATAACAACCAGCTTCTTCGAGCAAAGATAGCTGAAAGTGAGAGGAATCACCATAGCATTAATGTATTGCATGGAGGCACAAGCTATGACTCTATGCAGCAGTCTCAGCAGCAGCAGCATTTTGACTCACGTGGCTACTTTCAAGTCACAGGATTACAACCCAATAATCAATATGCACACCAAGACCACATGTCCCTTCAATTAGTGTAA 657 0.4049 MAEPIISWKPVPAWQRQPISASRKLSVKATIERYKKACSDSSGAGSASEANTQHYFIYILQFYQQEADKLRVQISNLQNNNRQVELTFVALGQKKVQLMMGESLGSMNAKDLKNLETKLEKGISKIRSKKNELLFAEIEYMQKRELDLYNNNQLLRAKIAESERNHHSINVLHGGTSYDSMQQSQQQQHFDSRGYFQVTGLQPNNQYAHQDHMSLQLV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1334 218 PANTHER MADS BOX PROTEIN 25 212 - -
Lal5g1334 218 PANTHER AGAMOUSB 25 212 - -
Lal5g1334 218 ProSiteProfiles K-box domain profile. 60 165 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lal5g1334 218 Pfam K-box region 93 159 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lal5g1334 218 Coils Coil 60 87 - -
Lal5g1334 218 Coils Coil 112 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1334 Lal-Chr5 16027148 16031313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1334 26 218 MADS-box Gene Family AT3G58780 51.531 9.17e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1334 K09264 - gmx:732595 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1334 5 16027148 16031313 Lal5g1334 5 16027148 16031313 ECH
Lal5g1334 5 16027148 16031313 Lal3g0385 3 2623389 2629137 LSH
Lal14g1230 14 14189891 14197151 Lal5g1334 5 16027148 16031313 PCT
Lal5g1334 5 16027148 16031313 Lal14g1230 14 14189891 14197151 PCT