Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1332 ATGGAATCCAAAAACCCTCCAAGGTTTACGTTATGGAAGCAATCATCTTTGGCCCCAGAACGCGACGATGAAGAATCAGGGTCCAACAAAGAAGATGATAGTGTGGAAGGTGTTGATCCGGGAGTGAGGTTGATGTATTCTGCAAATGAAGGAGATCTTGATGGGATTCTTGAGGTGTTGGAATCTGGCGTGAGTGTGAATTTCAGAGATATTGATTATCGTACGGCTCTTCATATTGCTGCTTGTCAGGGTTTGACTGATGTTGTTGCTTTGTTGATCGAGAAAGGTGCTGAAGTTGATCCTAAAGATCGATGGGGTAGCACGGATAATCAACATTCTCGTGCCGTTGCCTTGGAGCAAGAATTCTCTACTACTTCTATGGAGAATTTCCCAAATGTTTCCTCTTATTGTCAACGTCTCAAATCTATAGCAGATCAACTAAAGAACGTTAGGGCTCCGGTGTCCGATAGTCGATTGGCTCGTTCCATGTTCACTCTTGAGGAGGCTGGGTTGGCAAAGGAAGCAGCCACTGAGTTTGCTATGCTCGCCACTTCGATTGATGATGGATCCCCACACCCTGCAAAATCAGGACATTCGAAGGGCAAAAATGGTGCGCAACATTCTGGCGGTGGACGGCGCAACAACGGGGGTGGTCGGAAGTATGGAGGTTCTGGTGGAGGCCGGTCCTCGACCGGCGGTAAAGGTGGTGGTCGGGGGCAGTTCTCTGGTGGCCAAGTATGGAATTATGGTGTACATGGAATGAATGAATACATGATGGAGCTAGAGCCTAGAGGCATTTTGTGTACTCTTGCTATTTCTGGTACTTTGGCCTGGCATATAGGGTGGTTCAGTAACGTTAAGCCACTTGCAGATGCTATATACTATAAAAAGATCGATGTGATTAAGCTATTGGAGAAACATGGAGCAAAGCCTCTGGTGGCCTCTATGCATGTAAACCATGCACGTGAAGTCCCAGAATATGAAATAAGCTCTGAAGAGTTTGACTTTAGTAATAGCGTGGAGATCACAAAGGGAACTTTCTGTAGTGCATTCTGGCGTGGGACAGAGGTTGCAATTAAAAAGCTTAAGGAGGATGTGCTTACTGACGATGAGAAAGTTAAAGCCTTTAGAGATGAGCTTGCTCTATTCCAGAAGATTCGACATCCAAATGTCGTCCAATTTCTGGGTGCTGTGACGCAGAGTAATCCAATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTCCGTGCTTTCTTGAAAAGAAAAGGAGCTCTGAAACCATCAATAGCTGTGAGATTTGCACTTGATATTGCTAGAGGAGTGGGTTATTTGCATGAGAATAAGCCATCACCAATTATCCACGGTGATCTTGAGCCTTCGAATATACTGCGGGATGATTCTGGGCACCTAAAAGTCGCAGACCTTGGGGTTAGTAAGTTGCTAGCAGTTAAAGAAGACATGCCTCTAACTTGCCAAGATACTTCTTACCGCTATGCGGCTCCTGAGGTTTTCAAACAAGAAGAATATGACACCACAGTGGATGTTTTCTCATTTGCATTAATTCTTCAAGAGATGATTGAAGGGTGCCCGCCATTTTCTGCAAAGAAAGATGAAGAGGTTCCTAAGGTATATGCTGCAAAGGAGCGTCCACCTTTTAGAGCTCCATCCAAGCATTATGCCCATGGACTTAAAGAATTGATCGAAGAGTGCTGGAATGAGAATCCATCAAAGAGACCAACATTTAGGCAAATAATTACAAGGCTGGAATCCATCAAAAACATTATCGGTCACAAAAGACGTTGGAAGGTTAGGTCATTGAAATGCTTTCCAAATCTGGAAGCCTTATTGAAGAGGAATCATTCGAATCTAAGTAGTCGGGGCAATTCATCTCGCTCCATCTCCAGCCGTGTATGA 1917 0.446 MESKNPPRFTLWKQSSLAPERDDEESGSNKEDDSVEGVDPGVRLMYSANEGDLDGILEVLESGVSVNFRDIDYRTALHIAACQGLTDVVALLIEKGAEVDPKDRWGSTDNQHSRAVALEQEFSTTSMENFPNVSSYCQRLKSIADQLKNVRAPVSDSRLARSMFTLEEAGLAKEAATEFAMLATSIDDGSPHPAKSGHSKGKNGAQHSGGGRRNNGGGRKYGGSGGGRSSTGGKGGGRGQFSGGQVWNYGVHGMNEYMMELEPRGILCTLAISGTLAWHIGWFSNVKPLADAIYYKKIDVIKLLEKHGAKPLVASMHVNHAREVPEYEISSEEFDFSNSVEITKGTFCSAFWRGTEVAIKKLKEDVLTDDEKVKAFRDELALFQKIRHPNVVQFLGAVTQSNPMMIVTEYLPKGDLRAFLKRKGALKPSIAVRFALDIARGVGYLHENKPSPIIHGDLEPSNILRDDSGHLKVADLGVSKLLAVKEDMPLTCQDTSYRYAAPEVFKQEEYDTTVDVFSFALILQEMIEGCPPFSAKKDEEVPKVYAAKERPPFRAPSKHYAHGLKELIEECWNENPSKRPTFRQIITRLESIKNIIGHKRRWKVRSLKCFPNLEALLKRNHSNLSSRGNSSRSISSRV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1332 638 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Lal5g1332 638 SMART ANK_2a 284 313 IPR002110 GO:0005515
Lal5g1332 638 SMART ANK_2a 72 101 IPR002110 GO:0005515
Lal5g1332 638 Gene3D Transferase(Phosphotransferase) domain 1 316 608 - -
Lal5g1332 638 Pfam Ankyrin repeat 74 103 IPR002110 GO:0005515
Lal5g1332 638 ProSiteProfiles Protein kinase domain profile. 336 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1332 638 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 287 620 - -
Lal5g1332 638 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 109 - -
Lal5g1332 638 SUPERFAMILY Protein kinase-like (PK-like) 336 590 IPR011009 -
Lal5g1332 638 CDD STKc_MAP3K-like 342 589 - -
Lal5g1332 638 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Lal5g1332 638 SUPERFAMILY Ankyrin repeat 43 312 IPR036770 -
Lal5g1332 638 Gene3D - 38 112 IPR036770 -
Lal5g1332 638 Pfam Protein tyrosine and serine/threonine kinase 352 589 IPR001245 GO:0004672|GO:0006468
Lal5g1332 638 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 287 620 - -
Lal5g1332 638 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 109 - -
Lal5g1332 638 MobiDBLite consensus disorder prediction 185 239 - -
Lal5g1332 638 PIRSF ILK 1 122 - -
Lal5g1332 638 PIRSF ILK 284 610 - -
Lal5g1332 638 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1332 Lal-Chr5 16004700 16013820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1332 288 610 MAP Kinase Kinase Kinase AT4G18950 70.588 8.73e-166 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lal5g1332 PK_Tyr_Ser-Thr 8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1332 - - gmx:100790126 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1332 5 16004700 16013820 Lal5g1332 5 16004700 16013820 ECH
Lal5g1332 5 16004700 16013820 Lal3g0386 3 2646283 2658864 LSH