Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1303 ATGAAACCCTTTTTCATATTCTTGATTCTCCTAACACTCTTTGCTCTAGTGGAATCTGTTAGAATTATTTCATCTTCATGTAACATTAGAGACCTAGACCTTGTTTCAAAGGCCTTTCATTCTGTATCTGGGTTCAACCCTTTATGGTTCCAAACAAAAGCTTCTTCTTCATCCAACTGTTCAACCCTTCAGGTTACAAAGATAGAACTTGCATCCATGAACTTGAGTGGAAGTATCTCATGGGGGTACCTTAGAAACATGTCAAAGTTAGAGGTTTTAGATCTCTCTGAAAATTCACTTCAAGGTCAAGTTCCAAATTGGTTCTGGACAAGTACAACTTTATTAGTAGTGAATCTCTCTAACAACAGATTTGGAGGGAACATTGCTTTGAAATATCAACCCACTTCACAAAATGGTTCCTTTTCATCATTGCAAACACTTAATCTCTCACACAATAGGTTCACCAATCAAGTTCATCTTTCTGGATTCTCAAACCTGAAAACCCTTGACCTTTCTCATAACAATCTTGTTACTTTACCTTCTGGCTTCGAAAAAGTTACCAACCTACACCACCTTGATCTTTCAAACTGCAACATCAAAGGAAATGTAAAACCCATTTCAAATCTTCATTCACTCACTTACCTAGACTTATCAAACAACACTTTGAATGGTAGTTTCCCTTCTGAATTCCCTCCTCTCAACACCATCAAATTCTTCAACATTTCTCATAATAACTTCAAAGCATTAGTCACATTAGACAAGTTCAAGAAATTCAACAAATCAGCTTTCATTCACGCTGGTAAAAACTTCAACTACTACAACACATCAAAAAACATCGTCAAACATAAACAAAAACAAAAACATGTTCCATTACACTACCCCACAGAGAACAAGAAAAAGAAACACATATCAAAAACTAAACTCATTGCAGCATGTTGCGTAGCTTCAGTGTTTATCTTAGTAACCACGTGGACAATTTGGAGTTACGGAAAGAAGAAGCAAGTTGAGAAAAGGAAGAAGAAATGGGCAATCTCGAAACCGGTGTCGTTTAATGGAATAAAGGTAGAGAAATCTGGACCGTTCGAATTTGAAACAGAATCAGGTTCATCGTGGGTGGTGGATTTGAAGGAACCGTCTTCTGCGGCGGTGGTGATGGTGGAGAAGCCGTTGATGAAACTCAGTTTCAAGGACCTCATTGCTGCCACGTCACACTTCGGGAAAGAGTCACAACTCGCTGAGGGAAGGTGTGGGCCCGTTTACCGAGCTGTATTGCCAGGAGAGATCCACGTGGCAATCAAGGTTCTTGAGAATGCGAGAGACGTTGATCATGATGATGCTGTTGACATTTTCGTTGACCTTGCGAAGCTTAAGCATCCAAATTTGTTGACCCTCTCTGGTTATTGCATTGCAGGTAATGAGAAGCTGGTATTATACGAATTTATGTCAAATGGTGACTTGGGTAGATGGCTACACGAGCTACCCACCGGTGAGACCAACGTGGAAGACTGGAGTAATGACACGTGGGAGATTATTCAAAACGGCATCGTTTCAAATGTCACATCACCCGAAAAGATGGGTTGGCCCACACGTCACCGTATCGCCGTAGGGGTGGCGCGTGGCCTAGCCTTTCTCCACCATGCAGGATCAAAGCCTGTCGTACACGGCCACCTTGTCACGTCAAACGTGTTACTCGCTGACGACTTTGAGCCCCGAATCTCCGATTTCGGGTTCCGAAGAATCGGGAAGAACCGACAGATGCCAAATTGTTTCAGCACAGAGAGTGACGTGTACTGCTTTGGGGTGGTGTTGATGGAGCTGCTGACCGGGAGGTCAGGCACGGCGGAGACGGTGGTTTGGGTTAGGAAGTTAGTGAGGGAAGGGAACGGTGTGCGTGCTTTGGATGAGAGAGTGAGTCAAATCGGTGGTGGTGACTCGGAGAGTGAGATGAGTGAGTGTCTCCGAGTCGCGTATCTTTGTACGGCTGAGTCACCTGGGAAGAGACCCAGTATGAGGCAGGTATTGGGTCTTCTCAAAGATGTTCATCCAAGTCGCGAACTCGACTGA 2064 0.4356 MKPFFIFLILLTLFALVESVRIISSSCNIRDLDLVSKAFHSVSGFNPLWFQTKASSSSNCSTLQVTKIELASMNLSGSISWGYLRNMSKLEVLDLSENSLQGQVPNWFWTSTTLLVVNLSNNRFGGNIALKYQPTSQNGSFSSLQTLNLSHNRFTNQVHLSGFSNLKTLDLSHNNLVTLPSGFEKVTNLHHLDLSNCNIKGNVKPISNLHSLTYLDLSNNTLNGSFPSEFPPLNTIKFFNISHNNFKALVTLDKFKKFNKSAFIHAGKNFNYYNTSKNIVKHKQKQKHVPLHYPTENKKKKHISKTKLIAACCVASVFILVTTWTIWSYGKKKQVEKRKKKWAISKPVSFNGIKVEKSGPFEFETESGSSWVVDLKEPSSAAVVMVEKPLMKLSFKDLIAATSHFGKESQLAEGRCGPVYRAVLPGEIHVAIKVLENARDVDHDDAVDIFVDLAKLKHPNLLTLSGYCIAGNEKLVLYEFMSNGDLGRWLHELPTGETNVEDWSNDTWEIIQNGIVSNVTSPEKMGWPTRHRIAVGVARGLAFLHHAGSKPVVHGHLVTSNVLLADDFEPRISDFGFRRIGKNRQMPNCFSTESDVYCFGVVLMELLTGRSGTAETVVWVRKLVREGNGVRALDERVSQIGGGDSESEMSECLRVAYLCTAESPGKRPSMRQVLGLLKDVHPSRELD 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1303 687 ProSiteProfiles Leucine-rich repeat profile. 143 164 IPR001611 GO:0005515
Lal5g1303 687 PRINTS Leucine-rich repeat signature 166 179 - -
Lal5g1303 687 PRINTS Leucine-rich repeat signature 209 222 - -
Lal5g1303 687 SUPERFAMILY Protein kinase-like (PK-like) 384 677 IPR011009 -
Lal5g1303 687 ProSiteProfiles Leucine-rich repeat profile. 165 186 IPR001611 GO:0005515
Lal5g1303 687 ProSiteProfiles Protein kinase domain profile. 405 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1303 687 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 687 - -
Lal5g1303 687 SUPERFAMILY L domain-like 24 250 - -
Lal5g1303 687 Gene3D Phosphorylase Kinase; domain 1 365 480 - -
Lal5g1303 687 SMART LRR_typ_2 87 110 IPR003591 -
Lal5g1303 687 SMART LRR_typ_2 209 232 IPR003591 -
Lal5g1303 687 SMART LRR_typ_2 163 185 IPR003591 -
Lal5g1303 687 PANTHER KINASE, PUTATIVE-RELATED 3 687 - -
Lal5g1303 687 Pfam Leucine rich repeat 143 199 IPR001611 GO:0005515
Lal5g1303 687 Pfam Leucine rich repeat 66 124 IPR001611 GO:0005515
Lal5g1303 687 Gene3D Ribonuclease Inhibitor 136 268 IPR032675 -
Lal5g1303 687 Gene3D Ribonuclease Inhibitor 34 135 IPR032675 -
Lal5g1303 687 Gene3D Transferase(Phosphotransferase) domain 1 481 686 - -
Lal5g1303 687 Pfam Protein tyrosine and serine/threonine kinase 408 674 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1303 Lal-Chr5 15733565 15737401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1303 63 680 Receptor kinase-like Gene Family AT5G07280 31.259 2.54e-76 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lal5g1303 PK_Tyr_Ser-Thr 4.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1303 - - gmx:100778920 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1303 5 15733565 15737401 Lal5g1303 5 15733565 15737401 ECH
Lal14g1210 14 14061456 14065997 Lal5g1303 5 15733565 15737401 PCT
Lal5g1303 5 15733565 15737401 Lal14g1210 14 14061456 14065997 PCT