Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1302 ATGGCGGATATTGTTTTGAAGAGAAACAACATCAACCCCAACAAGAAAGAAATATCAAATCTATTACTTGGACGTTTTGAAATTGGAAAACTTCTTGGTCATGGAACCTTTGCAAAAGTGTACTATGCAAAGAACATAAAAACTGATGAAGGGGTAGCCATAAAAGTGATAGACAAAGAAAAAATCTTAAAGGGTGGTCTTGTGGCGCATATTAAGCGTGAGATCTCAATCCTGCGCCGTGTGCGCCACCCCAACATTGTTCAACTATTTGAGGTTATGGCCACAAAGGCAAAGATCTATTTTGTGATGGAATATGTTAGAGGGGGTGAGCTTTTCAACAAGGTTGCAAAGGGAAGATTGAAGGAAGAGGTTGCAAGGAAGTACTTTCAACAATTGATCTCAGCTGTTGAGTTTTGTCATGCTAGAGGTGTGTACCATAGGGATCTTAAACCTGAAAATTTGTTGCTAGATGAGAATGGTAACCTTAAAGTTTCTGATTTTGGGCTTAGTGCTGTGTCTGATCAAATGAGGCAAGATGGGTTGTTCCACACTTTTTGTGGGACACCTGCCTATGTTGCCCCTGAAGTTTTGGGTAGGAAAGGGTATAGTGGGGCTAAGGTTGATCTTTGGTCTTGTGGTGTTGTTTTGTTTGTGTTGATGGCAGGTTATTTACCATTCCATGATCAAAATGTTATGGCTATGTATAAGAAGATTTATAAGGGTGAATTTAGGTGTCCTAGGTGGTTCTCACCTGATCTCTCTAGGCTCCTAACCCGGCTTCTTGATATAAAGCCTGAAACCCGGATTGTGATTCCGGAGATTATGGAGAATAGGTGGTTCAAGAAAGGGTTCAAGCAAATTAAGTTTTATGTTGAGGATGATAGACTTTGTAATGTCGAGGATAGTCTCGAGGATAACGAGGATGATGCAGCATCGGTTGTTTCCGATTATTCGATCTCAGAATCTGATTCTGAGATGGAGATTAGGAGAAAGAATGCTCCATTGCCAAGACCAGCAAGCTTGAATGCTTTTGACATTATATCATTTTCTAAGGGTTTTGATCTTTCAGGATTGTTTGAGGAGAAAGGGGATGAGACCAGGTTCGTGACTGCTGCACCGGTGTCCAAGATTATATCGAAATTGGAGGAAATCGCTCAATTGGTTAGCTTTAGTGTAAGGAAGAAAGAATGTCGGGTAAGCTTGGAGGGTACTAGAGAAGGTGTAAAAGGGCCGCTGACTATTGCTGCCGAGATATTTGAATTGACACCTTCATTGGTAGTGATTGAGGTGAAGAAAAAAGGAGGGGATAGGGCAGAGTATGAAAAGTTTTGTAACACTGAATTGAAACCTGGGCTGGAGAATTTGATGGCGGGGGAATCTGCAACTTCTTCATTTTCGGCTGCGCCTACCGAGCCACACCTTTTACGCGTGTTCTCTGAGCCAATGCATATGTCTTCAGATATTGAATCTCCACACTATACACCTTCAGATATTGGATCTCCACGCTATACGGCTTCAGATATTGAATCTCCTCTCTATATGCCTTCAGATATTGAATCTCCTCTCTATATGCCTTCAGATTCAGATACATGA 1593 0.4149 MADIVLKRNNINPNKKEISNLLLGRFEIGKLLGHGTFAKVYYAKNIKTDEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVEFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQMRQDGLFHTFCGTPAYVAPEVLGRKGYSGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYKGEFRCPRWFSPDLSRLLTRLLDIKPETRIVIPEIMENRWFKKGFKQIKFYVEDDRLCNVEDSLEDNEDDAASVVSDYSISESDSEMEIRRKNAPLPRPASLNAFDIISFSKGFDLSGLFEEKGDETRFVTAAPVSKIISKLEEIAQLVSFSVRKKECRVSLEGTREGVKGPLTIAAEIFELTPSLVVIEVKKKGGDRAEYEKFCNTELKPGLENLMAGESATSSFSAAPTEPHLLRVFSEPMHMSSDIESPHYTPSDIGSPRYTASDIESPLYMPSDIESPLYMPSDSDT 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1302 530 CDD STKc_SnRK3 25 279 - -
Lal5g1302 530 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1302 530 Pfam NAF domain 338 394 IPR004041 GO:0007165
Lal5g1302 530 PANTHER - 7 460 - -
Lal5g1302 530 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Lal5g1302 530 Gene3D Kinase associated domain 1, KA1 336 457 - -
Lal5g1302 530 ProSiteProfiles NAF domain profile. 336 360 IPR018451 GO:0007165
Lal5g1302 530 CDD CIPK_C 342 452 - -
Lal5g1302 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Lal5g1302 530 SUPERFAMILY Protein kinase-like (PK-like) 22 281 IPR011009 -
Lal5g1302 530 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1302 530 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1302 530 MobiDBLite consensus disorder prediction 489 503 - -
Lal5g1302 530 Gene3D Transferase(Phosphotransferase) domain 1 16 335 - -
Lal5g1302 530 MobiDBLite consensus disorder prediction 487 530 - -
Lal5g1302 530 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 7 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1302 Lal-Chr5 15721678 15723270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1302 1 457 CBL-interacting serine-threonine protein kinases AT4G18700 78.261 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal5g1302 Pkinase 4.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1302 - - gmx:100814720 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1302 5 15721678 15723270 Lal5g1302 5 15721678 15723270 ECH
Lal5g1302 5 15721678 15723270 Lal3g0416 3 2887304 2888908 LSH