Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1300 ATGGGAATGACATGCAATACATTTGGATTTTGGCTTAGAATTTATGTTTGCTTGATTTCTGTGTGGGGAATCCAGAAGTGTTGGTCACTTAATGATGAAGGGTTAGCTTTGTTGGAGTTTCGGGCAAGAATAACTTCCGATCCTTATGTTGCTTTGGCAAATTGGAATACGAATGATTGCGACCCCTGCAAGTGGTTTGGTGTTCATTGTGTTGATGGTAAAGTAAAATTGCTGGAACTAAATGGTTTATCTTTGGAAGGGACATTGGCTCCTGAACTCGGGAAACTCAGAAACTTAAAATCACTTGTGTTATGCAAGAACAACTTTTCTGGTACCATTCCCAAAGAACTTGGAGGTCTAGTCATGCTGGAGTTATTGGATTTAAGGGAGAATAACTTAACTGGAAGCATCCCCGAAGAAATTGGCAATATGTCACTGCTAAAGCACTTGTTGCTTTGTGGCAACAAAATTGAAGGCAGTGATTCTCAAGATCACATCAAGTTCAGATTTCCCTATAAATCGCTAATTGTTGACAACTGTTCATCACCTCTGACTACTTTGTTTTCCTGCATCAATAGAAAGTTTGGGCACTGTGTGTGGCACAGAAAATTCAAGCAATGGAACACAACATATTCGTTGGTTATTTCAATGAAATTAGCACTTATGAAATACCTCAACGCCTTTGCACTTCCGCTGTTCAAGCTAAGAAAGGCTGCTTGTCATGGCCCTGAAGAGAGTTACCGTGACGATCCTAGTTCTGCTGAGCCTGAGATTGCTCTGAATGAAGAAAATCTTGTAAATTCTGCACATCGTAGATTACTTGACCAGTCCAGTAATCTTGCAGCTGCACCTTATAGTGGTGGATCTACTATAGTGATAAGTTCTGTTCCAACTTCCCTGAGTAGTGGAGCTTTTCAAGCTGTGCCAAATGCGAAAAAGGAACAGAATCAGTCACCTCCATTTTCTGATTCTCCGCATGATGCTTCTCACCATCTTTCTAATGGAAATCAACAACATTCACCTAATGGTGTTTCTGGAAACTTTTGGACGTATATAATTATTATTGCAGTTGTGGCTGTGTTGGTCATTGTTATAATAGTCATTCTTTGCATTTGGCGTAAAAAAGCAGCAAAAGTAATACGCCCCTGGAAGACAGGAATAAGTGGACAATTGCAGAAAGCATTTATAACAGGGGTCCCCAAGCTGAATCGAGCGGAACTAGAAACAGCATGTGAGGATTTCAGCAATATCATCAATAGTTATGATGAGTGCACCATATATAAAGGAACGCTATCCAGTGGAGTAGAGATTGCTGTTGTTTCTACTCTGATTTCATCTTCCCAAGAGTGGTCAAAGAGCATGGAGATGAACTACCGTAAAAAGATCGATACTTTGTCCCGTATAAACCATAAGAACTTTGTTAATCTTATTGGTTACTGTGAGGAAGAAGAACCATTTACAAGGATGATGGTGTTTGAGTATGCTCCGAATGGAAGCCTATTTGAGCATTTGCATGTTAAGGAAGTTGAACGTCTTGGTTGGAGCGAAAGGACGAGGATTATCATGGGCACTGCTTATTGCCTTCAGTACATGCACCATGATTTGAACCCACCAATATCTCATAGGAACCTCAATTCAAGTGCAATCTCATTGACAGATGATTTTGCTGCTAAGATTGGAGATATCACTTACGGAAATATTGTATCACCGATTACTAAGACAAGTGGAGATGATTCAAAGAAATCTGAGTTGCCACCCCATGCTGATCCTGAAACCAATGTCTATAACTTCGGAATATTGTTGCTTGAAATCATTTCTGGAAAGTTGCCTCACTCGGAAGAACAAGGCAACCTTGTGAACTGGGCTGCTGAGTACTTAAGCGACAAGCGAAGCATCAGCTATATGATTGATCCAACCCTGCAGTCTTTCAAAGACAATGAACTTGATGCAATGTGTGAAGTGATTCAAGATTGTATCCAACCTGATCCAAGGTTAAGACCAACAATGAGGGAAATTACAACAAAATTAAGGGAAGTAATCGGTATATCGCCGGAACAAGCCGTTCCAAGACTCTCTCCACTATGGTGGGCTGAGCTAGAGATCTTATCATTGGAGGCAGCTTAA 2124 0.4058 MGMTCNTFGFWLRIYVCLISVWGIQKCWSLNDEGLALLEFRARITSDPYVALANWNTNDCDPCKWFGVHCVDGKVKLLELNGLSLEGTLAPELGKLRNLKSLVLCKNNFSGTIPKELGGLVMLELLDLRENNLTGSIPEEIGNMSLLKHLLLCGNKIEGSDSQDHIKFRFPYKSLIVDNCSSPLTTLFSCINRKFGHCVWHRKFKQWNTTYSLVISMKLALMKYLNAFALPLFKLRKAACHGPEESYRDDPSSAEPEIALNEENLVNSAHRRLLDQSSNLAAAPYSGGSTIVISSVPTSLSSGAFQAVPNAKKEQNQSPPFSDSPHDASHHLSNGNQQHSPNGVSGNFWTYIIIIAVVAVLVIVIIVILCIWRKKAAKVIRPWKTGISGQLQKAFITGVPKLNRAELETACEDFSNIINSYDECTIYKGTLSSGVEIAVVSTLISSSQEWSKSMEMNYRKKIDTLSRINHKNFVNLIGYCEEEEPFTRMMVFEYAPNGSLFEHLHVKEVERLGWSERTRIIMGTAYCLQYMHHDLNPPISHRNLNSSAISLTDDFAAKIGDITYGNIVSPITKTSGDDSKKSELPPHADPETNVYNFGILLLEIISGKLPHSEEQGNLVNWAAEYLSDKRSISYMIDPTLQSFKDNELDAMCEVIQDCIQPDPRLRPTMREITTKLREVIGISPEQAVPRLSPLWWAELEILSLEAA 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1300 707 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lal5g1300 707 ProSiteProfiles Protein kinase domain profile. 294 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1300 707 PANTHER LRR RECEPTOR-LIKE KINASE 1 706 - -
Lal5g1300 707 Gene3D Phosphorylase Kinase; domain 1 384 494 - -
Lal5g1300 707 Gene3D Transferase(Phosphotransferase) domain 1 495 686 - -
Lal5g1300 707 Coils Coil 699 707 - -
Lal5g1300 707 Pfam Protein tyrosine and serine/threonine kinase 425 676 IPR001245 GO:0004672|GO:0006468
Lal5g1300 707 SUPERFAMILY Protein kinase-like (PK-like) 398 675 IPR011009 -
Lal5g1300 707 SUPERFAMILY L domain-like 29 164 - -
Lal5g1300 707 PANTHER PROTEIN MALE DISCOVERER 2 1 706 - -
Lal5g1300 707 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Lal5g1300 707 Gene3D Ribonuclease Inhibitor 29 195 IPR032675 -
Lal5g1300 707 MobiDBLite consensus disorder prediction 308 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1300 Lal-Chr5 15697274 15702946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1300 84 681 Receptor kinase-like Gene Family AT1G28440 24.887 9.86e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lal5g1300 PK_Tyr_Ser-Thr 2.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1300 - - lang:109337921 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1300 5 15697274 15702946 Lal5g1300 5 15697274 15702946 ECH