Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1299 ATGAACAACAACCCAGTTGTGGAAAAGTTTTCTCAGTTTTATCATAACTGGGTTTTGAAGCTTGAGGAAATCCTGCACCTGCTTCTAGAGATTTCCAAGAAGAGAAGTAACGAGAATGGTGAACAAGAGATGTTAGTTTTGGTGTCAAAAGTTACATCTCATATAAAAGAATACTATACTATGAAATGGGGTGCAGCTCATGAAGACGTTCTTGTTTTCTTCTCACCTGTTTGGTTGAATCCATTGGAGAATGCATACCTATGGGTCACTGGTTGGAAGCCTTCTACGGTTTTCAAATTGATGGAGTCTCTGAATAAAACGACAACGTTTAACATGACAGAGGAGCAGGAGAAGAAGATAGAGGTTCTGAGAATGAGGATCAGGATGGAGGAGGAGAAGGTGGAGAGTGAGATGGAGAGGAAGCAGGTGGCACTGGCTGATAGGAAGATGGTGGAGCTGGCAAGGATGTGTAGCAGAGTAAGGAATGATGGCGGTGGTGGTGGTGGTGGTGGTGATGTGGTGGTGGTGGCAGAAAAGGTTGATGAGGCTATGAAGGAAGTGTTGGCTGGGTTGGAGAAAATTATGAAGAGTTCTGATTGTGTTAGACTGAAGACACTTAAGGGTGTTTTGGATTTGCTTACACCAATGCAGTGTGTGTATTTCTTGGCTGCTAATATTGCTATGCAGCTTCGTCTCAAGCAATGGAATAAGAAGACAGATATTGGTGGATCCATAATGAATCATAACTTGATAAGTGATTGA 762 0.4252 MNNNPVVEKFSQFYHNWVLKLEEILHLLLEISKKRSNENGEQEMLVLVSKVTSHIKEYYTMKWGAAHEDVLVFFSPVWLNPLENAYLWVTGWKPSTVFKLMESLNKTTTFNMTEEQEKKIEVLRMRIRMEEEKVESEMERKQVALADRKMVELARMCSRVRNDGGGGGGGGDVVVVAEKVDEAMKEVLAGLEKIMKSSDCVRLKTLKGVLDLLTPMQCVYFLAANIAMQLRLKQWNKKTDIGGSIMNHNLISD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1299 253 ProSiteProfiles DOG1 domain profile. 7 242 IPR025422 GO:0006351|GO:0043565
Lal5g1299 253 Coils Coil 113 140 - -
Lal5g1299 253 PANTHER PROTEIN DOG1-LIKE 4 3 240 - -
Lal5g1299 253 PANTHER - 3 240 - -
Lal5g1299 253 Pfam Seed dormancy control 37 102 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1299 Lal-Chr5 15694952 15695713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1299 30 233 bZIP Transcription Factor Family AT5G06960 26.961 2.48e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1299 - - gmx:100808459 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1299 5 15694952 15695713 Lal5g1299 5 15694952 15695713 ECH
Lal5g1299 5 15694952 15695713 Lal3g0419 3 2901776 2902666 ECH