Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1287 ATGGATCAGATCACAACCCTTTGTGGGATTGAAGCTTGTGCTATAATATCTGGCCCCAATGAGCTTCATCCACAAGTTTGGCCACCCCATTTTGGGGTCCAAAGGGTGATATACAAGTTCATGAAAATGCCTGAAACGGATCAAGGCATGAAGATGCTGTTAATTCATGAGAGTTTCTTGAACCAAAGCTTCATGAAGACCCTAGAGAAGCTGAAAGAATTGAAGAAAATGAGAGTAGGAAGAAAGAGACGATTCTTCTCACGTATCAGTGCCTAA 276 0.4203 MDQITTLCGIEACAIISGPNELHPQVWPPHFGVQRVIYKFMKMPETDQGMKMLLIHESFLNQSFMKTLEKLKELKKMRVGRKRRFFSRISA 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1287 91 PANTHER MADS BOX PROTEIN 1 82 - -
Lal5g1287 91 SUPERFAMILY SRF-like 3 50 IPR036879 GO:0003677|GO:0046983
Lal5g1287 91 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1287 Lal-Chr5 15576211 15576486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1287 3 76 Type I MADS-box Gene Family AT5G48670 47.297 3.34e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1287 - - lang:109329408 107.457