Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1281 ATGGCACCTTCTTCTCCATCATCTGCATCATGCATTGTTGCATTATTTGTGTTGATGTTTCTTACAGGAACATGTTCAGCTAAACTATCTGAGAATTTCTATTCTGAGACATGTCCCAATGTTTTCAACACTGTAAAATCTGTTGTTAAATCTGCTATTTCCAATGAACCTCGAATTGGAGCATCTATTCTTCGACTCTTCTTCCATGACTGCTTTGTCGATGGTTGTGATGGTTCAGTATTACTGGATGATACTTCATCCTTCAGAGGAGAGAAAACAGCAGCTGCAAACAACAATTCTTTGAGAGGTTTTGAAGTAATTGATTCTATAAAGACAAAAGTGGAGGCATTATGCCCTGGTGTGGTGTCTTGTGCTGATATTTTGGCCATTGCTTCTCGTGACTCTGTTGTTATTCTTGGAGGACCTTTTTGGAATGTGAAAGGTGGAAGAAGGGATTCCAGAACAGCAAACTTCAATGCTGCTAACAGTGGTGTGATTCCACCTCCCAGCTCTAACCTCACTATTCTTATCTCAAAATTTCATGATCAAGGCCTATCTATTAAGGATATGGTTGCCTTATCTGGATCTCACACAATTGGGAAGTCAAGGTGTAGTAGTTTCAGAGATCGCATATACAACGAAAGCAATATTGATTGTACTTTTGCTACGACCAAACAGAGTAAGTGTCCATGTAAAAGTGGCTCTGGAGACAACAATTTAGAATTCTTAGATTTCCAAACTCCAAATCATTTTGACAATAATTACTACAAAAACCTTATCAACCAAAAGGGACTCCTTCATTCTGATCAGGTTCTCTTCAATGCTGGATCTACTGACTCACTTGTTTTAACTTACACCCTCAATGATAACATCTTTTACTCTGACTTTGTTATTGGAATGATTAAGATGGGAAATAACAAACCCTTAACTGGGTCACAAGGGGAGATAAGGAAGAACTGTAGGGTCCTTAATTAG 975 0.3846 MAPSSPSSASCIVALFVLMFLTGTCSAKLSENFYSETCPNVFNTVKSVVKSAISNEPRIGASILRLFFHDCFVDGCDGSVLLDDTSSFRGEKTAAANNNSLRGFEVIDSIKTKVEALCPGVVSCADILAIASRDSVVILGGPFWNVKGGRRDSRTANFNAANSGVIPPPSSNLTILISKFHDQGLSIKDMVALSGSHTIGKSRCSSFRDRIYNESNIDCTFATTKQSKCPCKSGSGDNNLEFLDFQTPNHFDNNYYKNLINQKGLLHSDQVLFNAGSTDSLVLTYTLNDNIFYSDFVIGMIKMGNNKPLTGSQGEIRKNCRVLN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1281 324 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601|GO:0042744
Lal5g1281 324 PANTHER PEROXIDASE 72-RELATED 12 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 ProSiteProfiles Plant heme peroxidase family profile. 28 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 SUPERFAMILY Heme-dependent peroxidases 29 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 Gene3D - 32 321 - -
Lal5g1281 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lal5g1281 324 PANTHER PEROXIDASE 12 321 - -
Lal5g1281 324 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal5g1281 324 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Lal5g1281 324 Gene3D Peroxidase, domain 2 167 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1281 Lal-Chr5 15501112 15504644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1281 27 320 Peroxidase AT5G05340 67.687 9.60e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1281 K00430 - gmx:100813384 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1281 5 15501112 15504644 Lal5g1281 5 15501112 15504644 ECH
Lal14g0785 14 9770536 9773543 Lal5g1281 5 15501112 15504644 ECH
Lal2g1957 2 21841376 21842613 Lal5g1281 5 15501112 15504644 ECH
Lal5g1281 5 15501112 15504644 Lal22g0327 22 2067510 2071720 PCT
Lal22g0327 22 2067510 2071720 Lal5g1281 5 15501112 15504644 PCT