Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1273 ATGTCTTGCAATAAAAAGTGCAAGGATGATGGAAAAACTGAGCATCTTTACATTGAAACTGACCCTACTGGACGCTATGGTAGGGTAGGAGATATTCTTGGAAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAGGTCCTTGGAGTAGAGGTAGCATGGAATCAAGTCAGACTCAATGAAGCACTTCGTTCACCGGACGACTTGGAACGGCTTTACTTAGAAGTTCATCTCCTCAGCACCCTCAAGCACCAATCCATCATGCAATTCTATACCTCTTGGATTGATGTTGACAAAAAGACTTTCAACTTCATCACAGAAATGTTCACTTCTGGAACACTTAGAGAATACAGGAAGAAATATAAGCAAGTAGGCATACAAGCAATAACGAGTTGGGCACGCCAAATCTTACAGGGACTTGTTTATCTACACGAACATGACCCGCCAGTAATTCATAGGGACCTCAAATGTGATAACATATTTGTTAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTCGGTCTTGCAGCAATACTCCGCGGTTCCCAGCCAGCTCACAGTGTTATAGGCACCCCCGAGTTCATGGCACCAGAATTGTACGAGGAAGAATACAATGAACTTGTCGATGTTTACTCCTTTGGCATGTGTGTTTTGGAAATGCTTACATCTGACTATCCATATAGTGAATGTTCTAACCCTGCACAGATATACAAGAAAGTGACATCGGGGAAATTACCAGCAGCCTTTTACCAGATTGAAGACACGGACGCAAAGAAGTTTATCGGCAAATGCTTAGTAACTGCAGCAAAGAGACCATCAGCGAAAGAATTGTTGCATGATCCCTTTCTCGCGTCCAGTGACGCATCAACCATGACAAAGATTGGAATTCAGGAGCCGTTTTTAAATTACAATGAAATGGATAAACTTCAGTTGAGTGAGGATTTACCTAGGACTGAAATGTCAATAACTGGGAAGCTCAATCCTGAAAATGATACTATCTTTCTCAAAGTGAAAATTGCTGATAAGGATGGTTCAAGTAGGAATGTATTTTTTCCATTTGACGTTTTCTCTGACACACCAATTGATGTTGCAAAGGAAATGGTGAAAGAATTGGAGATCACAGATTTGGAGCCTTATGAAATTGCAACTATGATTGAAGGGGAGATATATTTGCTGCTCCCAAATAAGAGGAAAAGTAGCTTTTCAGACAGCTATCATACATTCCATTATCAAGATGACGATGACGACGATGATCGTGATGATAACGATGTACTTCATCAAGATTTCCACTACATTTCTTCCTGTTCATTGCCTAAAGAATCAATATCAGGTTTACTCAGTAAAGAAGATGAAATTTCAAATAGATATTATTGGAACCAAGATGACATGCATGATGATGCAAGTTCAAGATGCTCTTCACAAGGGACATATTCCAACTTTAATTATTTCAATGTAGATGACAAGGAGAACAATGCAGCATCTACAAGAAAAGATAAACATCCCATCACAAAGAGTCACAAGTGTACAAGGTCTCTCCATGGAGAAGATTCAATCACTTCCAAGCAAGGCAAAGTGTTAGCCGGACTGCAAGCACCTTCTACTATTCAAAGTAAGAGGATGATAGACAATTGCAGTAGGCTAACAAGGAACAACTCACTAATTGATATGAGGAGCCAATTACTACATCGATCATTAGTTGAGGAAGTAAACAAAAGACGGTTGTTCAATACAGTTGGAGCTGTGGAAAATATCGGATTTCAGACACCTCGTGATGTTTCCATAAAAAAATCACAGCCAGTATTTGGTGCTATAAATCTGAACTATTCTAGGAGTGGCAAGGGAGAAAACTTGACAGCTAAAAAGAACTAG 1875 0.3979 MSCNKKCKDDGKTEHLYIETDPTGRYGRVGDILGKGAMKTVYKAIDEVLGVEVAWNQVRLNEALRSPDDLERLYLEVHLLSTLKHQSIMQFYTSWIDVDKKTFNFITEMFTSGTLREYRKKYKQVGIQAITSWARQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPAAFYQIEDTDAKKFIGKCLVTAAKRPSAKELLHDPFLASSDASTMTKIGIQEPFLNYNEMDKLQLSEDLPRTEMSITGKLNPENDTIFLKVKIADKDGSSRNVFFPFDVFSDTPIDVAKEMVKELEITDLEPYEIATMIEGEIYLLLPNKRKSSFSDSYHTFHYQDDDDDDDRDDNDVLHQDFHYISSCSLPKESISGLLSKEDEISNRYYWNQDDMHDDASSRCSSQGTYSNFNYFNVDDKENNAASTRKDKHPITKSHKCTRSLHGEDSITSKQGKVLAGLQAPSTIQSKRMIDNCSRLTRNNSLIDMRSQLLHRSLVEEVNKRRLFNTVGAVENIGFQTPRDVSIKKSQPVFGAINLNYSRSGKGENLTAKKN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1273 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lal5g1273 624 SUPERFAMILY Protein kinase-like (PK-like) 28 321 IPR011009 -
Lal5g1273 624 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1273 624 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 23 601 - -
Lal5g1273 624 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Lal5g1273 624 CDD STKc_WNK 25 285 - -
Lal5g1273 624 PANTHER WNK KINASE 23 601 - -
Lal5g1273 624 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Lal5g1273 624 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1273 624 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1273 Lal-Chr5 15448171 15453135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1273 17 597 MAP Kinase Kinase Kinase AT5G58350 57.363 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lal5g1273 Pkinase 5.3e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1273 5 15448171 15453135 Lal5g1273 5 15448171 15453135 ECH
Lal5g1273 5 15448171 15453135 Lal18g1277 18 15369404 15373756 PCT
Lal5g1273 5 15448171 15453135 Lal6g0352 6 2233444 2237963 PCT
Lal18g1277 18 15369404 15373756 Lal5g1273 5 15448171 15453135 PCT
Lal6g0352 6 2233444 2237963 Lal5g1273 5 15448171 15453135 PCT