Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1268 ATGGATTCCGAAATTTCCCGATGGGTTCTTGAATTCCTTCTTCGTAGCACCGTTTCCGATTCCCTCATCGCTAAAACCCTAACCGCTCTTCCTCTCTCCGCCGCCGATTCCCGCCTCAAGAAAACCATCCTCCTCCGCACCCTCCAATCCTTCCACTCTAATGCCTCAATCACCGAAACTGCTCTCCAAATCTTCGAACTCATCGAAGAGATTGACCTAAACGACGCCGTTCCGATAACGGATTCAATGCGCCGCGCCTTCTGTGCCGTCGCGGTCGAGTGCACTGTCAAGTACCTCGCTGCATGCCCTGATGATGCCGCGGGGAATTACTTCGCTGCCGTGAGGAGGATCTGGCGGGGGAGGGTGGCGAAGATGGAGAGTGCTGGTCGCCGGGGAGGGTTGTTCTCGGAGGAGTTGGCACAGTGGAGGGATGAATTGGAAGCTGCGGTTTGGGATAATAGGGTTTGTGAGAGGCTGGTTGGGTTGAATAGTAGGACTGAGGCGCTGAATGAGATGAAGGTGTATTTGAAGGAAGCGTGGGAGGTTATGGGTCCTTCCTTTCTTGATTCGATTGCGGTGATGGCGAAGGCGAAGGGTTTGCACTTTAATTTTGGTGGAGAATCGGTTGGGAACCGTAATGGAGGGTTAGAGGTTTCGGCTAATGTTGATGGTAATGATGATGATGCTAACAATCATGATAATGATGGTGATGCTATCAATCATGATAATGATGTTGCTAACAATCACGACAACGGTGGTGATGCTAGCAATCACGATAATGATGGTCATGATGATGGTGCATGCCACGAGGATGATAAAAATCCGGACAAGGAAGATGACTTGGAAGAGAGAGTTGGGCCTTCTGTTGATTTAAAGGATGATTTGGCTGCGGAGAGAGACACAGAAATTCAGAAAGGCAATCTTCAACCTAAACGTAAGCACCTTGCACATACATGCCCTGACAGTATTGGTGAATTTGCTTATGGTGGCGAGCTGAAGAGGAAGCGTGATGAAGGGTTAAAAGGTTTGACAAAGCAGAGGAGGGACTTTGCTGGTGGTGATCGGAGTGAACCAGATGATGGTGGTGTATGCTGCACGGAAGATGTGTCAGTATCTGGTGAAAAGCAACAGCAGGTGGAAGAGAGAGTTGAGACTTCTGTTGATGGGAATCAGGAATTGGGTGGATGTGACTTGCCTGCACAGGGAGAGAAAGAAATTCAGAAAGACAATCTTAAGCATAGATTCAAGCACACTGCACTTCGTAGATGCCATAAGGGAGTTAAACTGTCTGGTTCTGAGGAAGTGGAACCAGCAAAATCATGGAGGAAATGTGATTCTGTGCCTAGTGCGGAAGTTAAAAAAGTTCGTGAATCTCTTAAATCAAGTTCTTCGGAGCTGCAAGCATTGGTTAAGGATCCTCTTCCTGATGCATTGCAAACATCTGAAGTTGTAAGGTCCAAATATGCAGTAAAAGACATTAACCAGAATGGAGCTGTAGATGTACCAGATCCAATTGTCTGCAAGAGTATTGTACCTTTTCAACCAAATGATGCTAATCTTGTAAAGCAGCCTTTTGTTCATTGTAGTAATAATGTTCGTCGCCCCAACTTATTGGAACGGAAAGCTACAGCTCGTACTTATGAGTGGGATGATTCCTTAGGTAACTCGCCACAAGTTTCACAGCCAAGAAAGAGGAAAAGAAAATGGACTTCATTGGAAGAGGAGACACTAAGGGATGGTGTAAAAATGTTTGGAGAAGGAAGCTGGGCAGCAATCCGAAGTTTTTATAGTAACATATTTGAAAACAGAAGTGGAATCCTGCTAGTGCGGTTAGTGGGGACCAACTTTTATTTAAGCCTTTGCAAGTGGCCACTACTCAAAACACCTTTTCTTTCATCTGAAGGTTCCAGTTTTGAGGGTTCATCTGAA 1929 0.4619 MDSEISRWVLEFLLRSTVSDSLIAKTLTALPLSAADSRLKKTILLRTLQSFHSNASITETALQIFELIEEIDLNDAVPITDSMRRAFCAVAVECTVKYLAACPDDAAGNYFAAVRRIWRGRVAKMESAGRRGGLFSEELAQWRDELEAAVWDNRVCERLVGLNSRTEALNEMKVYLKEAWEVMGPSFLDSIAVMAKAKGLHFNFGGESVGNRNGGLEVSANVDGNDDDANNHDNDGDAINHDNDVANNHDNGGDASNHDNDGHDDGACHEDDKNPDKEDDLEERVGPSVDLKDDLAAERDTEIQKGNLQPKRKHLAHTCPDSIGEFAYGGELKRKRDEGLKGLTKQRRDFAGGDRSEPDDGGVCCTEDVSVSGEKQQQVEERVETSVDGNQELGGCDLPAQGEKEIQKDNLKHRFKHTALRRCHKGVKLSGSEEVEPAKSWRKCDSVPSAEVKKVRESLKSSSSELQALVKDPLPDALQTSEVVRSKYAVKDINQNGAVDVPDPIVCKSIVPFQPNDANLVKQPFVHCSNNVRRPNLLERKATARTYEWDDSLGNSPQVSQPRKRKRKWTSLEEETLRDGVKMFGEGSWAAIRSFYSNIFENRSGILLVRLVGTNFYLSLCKWPLLKTPFLSSEGSSFEGSSE 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1268 643 SUPERFAMILY Homeodomain-like 562 606 IPR009057 -
Lal5g1268 643 ProSiteProfiles Myb-like domain profile. 561 605 IPR001005 -
Lal5g1268 643 Gene3D - 557 609 - -
Lal5g1268 643 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 561 592 IPR017930 -
Lal5g1268 643 MobiDBLite consensus disorder prediction 215 296 - -
Lal5g1268 643 PANTHER MYB TRANSCRIPTION FACTOR 1 604 - -
Lal5g1268 643 MobiDBLite consensus disorder prediction 550 571 - -
Lal5g1268 643 PANTHER MYB TRANSCRIPTION FACTOR 1 604 - -
Lal5g1268 643 MobiDBLite consensus disorder prediction 339 362 - -
Lal5g1268 643 MobiDBLite consensus disorder prediction 226 296 - -
Lal5g1268 643 CDD SANT_TRF 567 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1268 Lal-Chr5 15401284 15406707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1268 5 212 Single Myb Histone (SMH) Gene Family AT1G15720 29.245 3.17e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1268 - - lang:109329694 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1268 5 15401284 15406707 Lal5g1268 5 15401284 15406707 ECH
Lal5g1268 5 15401284 15406707 Lal3g0440 3 3053268 3058766 LSH