Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1265 ATGCAACACTCTCCTTCCGAACCTAACCCTAATCCCAATCCCAATGAACATTTCCCGCAACCACCTTCCACTTCTCCGTCCACGGCGGCGACGCCAACCGCCGCCATCTCCGCTTTCACTCGCGTCACTTCTTCCGAACCCGGAGAATCCCACCACCGGCGATCCCAATCAGAGATGAGTTTCCGGATGCCGGACGACATGATGGACTTGTCGCTGTCTGATCCGTTCAACGGCGGTTCTTCCACCGCCAGCTTGGAGGAGATCGGATCGGAGGAAGGCCTCTTCTCAACCTACATTGACGTTGAGAAGATCGGAGGAACAACGAACGAGTCAGGTTACGTTGAAAATGGATCGGATCAGGTCGGTTATGGGAACAATAGTAGCGGCTCCGGCGCCGGAACGAGTGGTAAAAATGACGGAGAGCGTAGCCCGAGGCTAAGACAGAAGCATAGTAGCTCCGTCGACGGTTCCACGTCGACGAGCATGTTGGGAGAGATCACGGAGGCGAAGAAAGCAATGCCTCCTGAGAAGCTCGCTGAGTTATGGACCATTGATCCAAAACGTGCTAAGAGAATACTTGCGAATCGGCAATCTGCTGCACGCTCAAAAGAGAGAAAGGCCCGCTATATACAAGAACTTGAGCACAAAGTTCACACCCTTCAAACTGAAGCCACAACTCTTTCTGCCCAACTGACACTATACCAGAGGGACACAACTGGTCTGAGTTCTGAAAATACAGAGCTTAAGTTCCGTCTGCAAGGCATGGAGCAACAAGCACAGCTTCGTAATGCTCTCAATGATGCATTGATGAAGGAAATTGAGAGGCTTAAGGTTGCTACAGGAGAGGCAATGAACCTCCCTGAGTCTTTAAATATCGGAATGCACCAAATACCATTTGCAGGGTCAAATTTCTTTCCAATCCCACCACACTCAGATCCTTCTGGTCATCAGAACATACAGACACAGTTGCCTTCGTTCGGTCAAGCCCCATCTAGCATGCCAACTCATCAACTTCAACAATCAAATTCTCAGCAACTCTCTGACATGTTGCAAAATGATCAACTCAGTCGTTTACAGGGACTTGACATTAGTAACAAAGGGTCAAACATAGTGAAGCCTGAAGTCCCCTCAGTTTCTGCAAGTGAGAGCAGCACTACATTTTGA 1164 0.4957 MQHSPSEPNPNPNPNEHFPQPPSTSPSTAATPTAAISAFTRVTSSEPGESHHRRSQSEMSFRMPDDMMDLSLSDPFNGGSSTASLEEIGSEEGLFSTYIDVEKIGGTTNESGYVENGSDQVGYGNNSSGSGAGTSGKNDGERSPRLRQKHSSSVDGSTSTSMLGEITEAKKAMPPEKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELEHKVHTLQTEATTLSAQLTLYQRDTTGLSSENTELKFRLQGMEQQAQLRNALNDALMKEIERLKVATGEAMNLPESLNIGMHQIPFAGSNFFPIPPHSDPSGHQNIQTQLPSFGQAPSSMPTHQLQQSNSQQLSDMLQNDQLSRLQGLDISNKGSNIVKPEVPSVSASESSTTF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1265 387 MobiDBLite consensus disorder prediction 110 137 - -
Lal5g1265 387 Pfam bZIP transcription factor 187 245 IPR004827 GO:0003700|GO:0006355
Lal5g1265 387 Coils Coil 210 230 - -
Lal5g1265 387 MobiDBLite consensus disorder prediction 313 346 - -
Lal5g1265 387 Gene3D - 186 239 - -
Lal5g1265 387 MobiDBLite consensus disorder prediction 22 45 - -
Lal5g1265 387 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 248 IPR004827 GO:0003700|GO:0006355
Lal5g1265 387 PANTHER BZIP TRANSCRIPTION FACTOR 6 384 - -
Lal5g1265 387 MobiDBLite consensus disorder prediction 304 346 - -
Lal5g1265 387 CDD bZIP_plant_RF2 188 237 IPR044759 GO:0003700|GO:0006355
Lal5g1265 387 SUPERFAMILY Leucine zipper domain 187 238 IPR046347 GO:0003700|GO:0006355
Lal5g1265 387 SMART brlzneu 183 247 IPR004827 GO:0003700|GO:0006355
Lal5g1265 387 MobiDBLite consensus disorder prediction 7 21 - -
Lal5g1265 387 MobiDBLite consensus disorder prediction 110 161 - -
Lal5g1265 387 MobiDBLite consensus disorder prediction 1 91 - -
Lal5g1265 387 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 384 - -
Lal5g1265 387 MobiDBLite consensus disorder prediction 365 387 - -
Lal5g1265 387 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1265 Lal-Chr5 15379550 15383587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1265 51 387 bZIP Transcription Factor Family AT2G40620 48.189 3.07e-86 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal5g1265 bZIP_1 3.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1265 - - gmx:100775607 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1265 5 15379550 15383587 Lal5g1265 5 15379550 15383587 ECH
Lal5g1265 5 15379550 15383587 Lal3g0441 3 3058907 3062274 LSH
Lal5g1265 5 15379550 15383587 Lal18g1279 18 15387894 15391254 PCT
Lal5g1265 5 15379550 15383587 Lal22g0319 22 2024852 2028269 PCT
Lal18g1279 18 15387894 15391254 Lal5g1265 5 15379550 15383587 PCT
Lal22g0319 22 2024852 2028269 Lal5g1265 5 15379550 15383587 PCT