Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1261 ATGGATCTCCTCATGTTGGAGAAGATTCTCATTGCTTTATTTATAACTATCGTGACCGCAATTGTGATCGCAAAATTCTGCGGGAAGTGTTTGAAACTCCCGCCAAGCCCATTGCCAGTTCCTATTTTTGGGAACTGGCTCCAAGTTGGCGATGACCTCAATCACCGCAACCTCACCGACCTCGCGAAGAAATTCGGCGACATCTTCCTCCTCCGCATGGGTCAGCGCAACCTCGTCGTGGTATCTTCCCCGGAACTCGCCAAAGAGGTTCTCCACACACAGGGCGTGGAGTTCGGCTCTCGAACCCGCAACGTCGTCTTCGACATCTTCACCGGAAAAGGACAAGACATGGTGTTCACGGTGTACGGGGAGCATTGGCGCAAAATGCGGAGGATCATGACGGTGCCGTTTTTCACCAACAAGGTGGTTCAGCAGTACCGGTTCGGGTGGGAGGAGGAGGCAGCGCGTGTGGTTGACGACGTGAGGAAGAGCGGTGAAGCCGCCACAATAGGGATTGTGTTGAGGAAAAGGTTGCAACTAATGATGTATAATAACATGTATCGGATAATGTTTGATAAAAGGTTTGAGAACATGGAGGATCCTTTGTTTCAGAAGCTTAGGGCTTTGAATGGTGAAAGAAGCCGTTTGGCTCAGAGTTTTGAGTACAATTATGGTGATTTTATACCTATCTTGAGACCCTTCTTAAGAGGGTACTTGAAAATTTGTAAGGAGGTTAAGGACACAAGGTTTCAGATTTTCAAGGACTGTTTCGTTGAAGAGAGAAAGAAGGTTGAGAGTACAAAGAGAAGTGAGAATGAAGGATTGAAATGTGCGATTGATCACATTTTGGATGCCCAGAAAAAAGGGGAGATCAACGAAGACAACGTTCTTTACATTGTTGAGAATATTAACGTTGCTGGTAATTCTTAA 930 0.4634 MDLLMLEKILIALFITIVTAIVIAKFCGKCLKLPPSPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWEEEAARVVDDVRKSGEAATIGIVLRKRLQLMMYNNMYRIMFDKRFENMEDPLFQKLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKDTRFQIFKDCFVEERKKVESTKRSENEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAGNS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1261 309 Pfam Cytochrome P450 34 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1261 309 Gene3D Cytochrome P450 29 309 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1261 309 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 306 - -
Lal5g1261 309 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 306 - -
Lal5g1261 309 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1261 309 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1261 309 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1261 309 PRINTS E-class P450 group I signature 295 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1261 309 SUPERFAMILY Cytochrome P450 34 307 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1261 Lal-Chr5 15345722 15349189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1261 1 307 Monolignol Biosynthesis Gene Families AT2G30490 79.805 2.53e-174 490
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1261 5 15345722 15349189 Lal5g1261 5 15345722 15349189 ECH
Lal5g1261 5 15345722 15349189 Lal18g1280 18 15395143 15398769 PCT
Lal5g1261 5 15345722 15349189 Lal6g0349 6 2206779 2212027 PCT
Lal18g1280 18 15395143 15398769 Lal5g1261 5 15345722 15349189 PCT
Lal6g0349 6 2206779 2212027 Lal5g1261 5 15345722 15349189 PCT