Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1259 ATGGCAGACGAAGCACGCAATGATTTCAAGGAGGAGGTCCCAGAAGTTGTGCCATTTGATCCTACTAAGAAGAAGAAGAAAAAGAAAATTACCATTATTGATCCCGCTGATGATCCAGTGGATAAATTGGCTGAAAAGACAGAAAATCTCTCAGTTTCTGAAGGTGTTGAGAGTACATTTGCTGGTTTGAAAAAGAAGAAAAAGAAGCCGGTTGAAATCAGTAACTTAAATGATGAGAATGAAGATTTACCTGAAGATTTGGATGCCGTAGATCCTGCTGAAGAAGATGAAGGTGACATTTCTTCCTTGCTGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATGAATATGAGGAGCTTCTGGGCAGGGTGTTTAACATTTTACGCGAGAATAATCCAGAGCTTGCTGGAGACCGGCGGAGGACTGTTATGAGGCCCCCACAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGCAAAACAATGCATCGGCAGCCAGACCATGTCATGGCTTTTCTGCTTGCTGAGCTGGGTACTAGTGGCTCTTTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATATCAATGAATATGTCATTTGCCTCGGATGCAAAAGTCCCGACACAATACTTAGTAAGGAGAATCGTCTCTTCTTTCTTCGGTGTGAAAAGGTGAACCCTTCTCTCTTTTCATTCTGGACTGTAATTCTGTTAAACCTCATTGTTTACCCTTCCCCTCTTGGAAAGTGTGGATCAGGAAGGTCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAATGCAGGCACATAA 888 0.4313 MADEARNDFKEEVPEVVPFDPTKKKKKKKITIIDPADDPVDKLAEKTENLSVSEGVESTFAGLKKKKKKPVEISNLNDENEDLPEDLDAVDPAEEDEGDISSLLPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKVNPSLFSFWTVILLNLIVYPSPLGKCGSGRSVAPIKAGFVARVGRRNAGT 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1259 295 Pfam Domain found in IF2B/IF5 139 245 IPR002735 GO:0003743|GO:0006413
Lal5g1259 295 SMART eIF2Bneu4 140 274 IPR002735 GO:0003743|GO:0006413
Lal5g1259 295 Gene3D - 113 249 - -
Lal5g1259 295 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 247 IPR045196 GO:0003743|GO:0006413
Lal5g1259 295 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 270 295 IPR045196 GO:0003743|GO:0006413
Lal5g1259 295 MobiDBLite consensus disorder prediction 65 86 - -
Lal5g1259 295 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 247 - -
Lal5g1259 295 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 270 295 - -
Lal5g1259 295 MobiDBLite consensus disorder prediction 1 27 - -
Lal5g1259 295 MobiDBLite consensus disorder prediction 1 22 - -
Lal5g1259 295 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 115 222 IPR016189 GO:0003743|GO:0006413
Lal5g1259 295 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 219 245 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1259 Lal-Chr5 15328563 15332389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1259 1 291 Eukaryotic Initiation Factors Gene Family AT5G20920 69.048 8.42e-129 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1259 K03238 - gmx:100783618 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1259 5 15328563 15332389 Lal5g1259 5 15328563 15332389 ECH