Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1254 ATGTATCCGTCAAAAGGTTGCAAGCATGGAGTGTTTGTTTTCAGCTTGTGGTTCTGCTGCTATTTGCTACTGGCTGCAGAACAGAATGGCATCACTAAACCCACTGAAGTTGAAGCATTGAAAGCCATAAAGATAAGTTTGATTGATCCTAATGGAAATTTGAGCAATTGGGATCTCGGAGACCCATGCACAGCTAACTGGACAGGAGTTCTGTGTTTCAACGACACATTACTCGATGGCTATCTGCATGTTCAAGAATTACAACTGCTAAAGTTGAACTTGTCAGGAACTCTGGCACCAGAGATTGGCAACTTGACTTATATGCAAAGACTGAACTTTATGTGGAACAACATAAGCGGGAGTATTCCGAAGGAGATAGGCAATATTAAAAGTTTGCAACTCTTGCTCCTGAATGGAAATCAATTAACAGGTCCTCTGCCAGAGGAGCTTGGTTATCTTCCGGTCCTAGACAGAATACAAATCGATCAGAACCACATAACAGGACCTTTACCTTTATCATTTTCAAATCTAAACAAGACAAAGCACTTTCACATGAACAATAATTCAATAAGCGGGCAAATCCCACCAGAGCTTTCCAGATTACCAAGCCTTGTTCATCTCCTTCTCGACAACAACAACTTATCAGGATATCTTCCCCCTGAGCTGTCCAATTTACCGAACTTACTTATAGTTCAACTTGATAACAATAACTTTGGTGGAAATAGCATCCCAGATTCCTACCGCAACATGTCAAAATTGTTGAAATTGAGCCTTAGGAATTGCAATTTGACAGGACCAATTCCTGATCTAAGCACAATACCACACCTTGGTTATCTTGACCTCAGTTCCAATCAGTTGAATGGATCGATTCCCCCTAACAAGCTTTCTGAAAACATCACAACCATCGATTTATCAAACAACAAGCTTACTGGAACTATTCCACCCTACTTTTCTGGTCTTCAGCGCCTTCAGAAACTGTCACTTGCAAACAATTCATTGAATGGTAGTGTTCCTTCCACCATCTGGCAGAACAAGACTTCAAATGGAACAGAAATATTTCTCTTGGATTTTCAAAATAATGAACTTACAAGCATATCAGGCAATACTAATCTTCCTCCAAATGTCACTCTCGAGCTTAATGGTAATCCTCTGTGCTCAAACTACACCCTAACTCAGTTCTGTGGATCCGAAGCTGCTCCCACTGACCCAAACGGCTTAATTCCTGCAAATCCCAATGCTTCCTGTCCTACTCAAGCATGTCCCCCTCCTTATGAATACTCTGTAGATTGTTTCTGTGCAGCACCATTGCTTGTTGGTTATCGGTTGAAAAGTCCTGGATTTTCAGATTTTCGCCCATACAAGGAGACATTTGAGGACTACCTGACTTCTGGTCTTGATATATCTACCGATCAGCTTCAGTTTACTTTTAGATGGCAAGTAGGACCTCGTCTGAGCATGGAGTTGAAGCTTTTCCCCGAATATGTTGTCAATAGTAGCACTCATATTTTTAATGACAGTGAGCTCCTGCGGATCACAAGCATGTTCACGGGATGGAAAATTCCAGACAGTGACTTGTTTGGGCCTTATGAACTACTTAACTTCACTCTGCTAGATCCTTACAAGGATGTGATTTTCACCTCTTCAAAATCAGGGTCTGGGATAAGTAAGGGTGCACTGGCTGGCATAGTCTTAGGGTCAATTGCCTGTGCAGTGACATTATCTGCAATTGTTACTATTATCATATTAAGAGTAAAATTGAAAGATCATCCATCTAAGACCATAATAAAAATTGACGGTGTAAGGTCGTTCACTTATGAAGAAGTGTCATCTGCAACACACAATTTTAGCAACACTGCTCAAGTTGGACAAGGGGGCTATGGGAAGGTTTATAAAGGCGTTCTACAAAACGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGATCACTGCAAGGTGAGAAGGAGTTTCTTACAGAAATATCATTACTGTCAAGGTTACATCATCGCAACCTTGTCTCTCTGATCGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAACGGGACGCTAAGGGATCACCTTTCAGCTACATCAAAAGAACCTCCGAATTTTGCCATCAGAATGAAGGTAGCACTAGGGTCAGCTAAAGGTCTCGCGTATCTACACACTGAAGCTGATCCTCCAATATTTCACCGAGATGTCAAGGCGAGCAATATATTACTGGACTCTAATTTCACTGCAAAAGTGGCTGATTTTGGACTTTCAAGGCTTGCCCCAGTTCCAGACCTCGAAGGAGTTGTTCCTGGTCATGTATCAACAGTGGTAAAGGGGACCCCGGGTTACCTTGACCCGGAGTACTTCTTAACTCACAAGTTAACCGACAAGAGTGATGTTTATAGTCTCGGTGTCGTATTTCTGGAACTTTTGACTGGGATGCATCCAATCTCACATGGCAAAAACATTGTTAGAGAGGTTAATGTAGCATACCAATCCGGTGTGATATTTTCCGTTATCGATGAACGGATAGGGTCTTATCCATCCGAGCATGTAGAGAAATTTTTAACTTTGGCCCTCAAGTGTTGCGAAGACGATCCGGAGGCACGGCCTAGAATGACAGAAGTGGTTAGAGAGCTTGAAAACATATGGTCCATGATGCCTGAATCAGATACCAAGAAAGCTGAATCTGTAACTAGTGATTCAGGAAAATTATTCAGCATAACATCTTCATCTTCTACTACAAAAACTCATTTTGTATCTGGAGATGTATCAGGCAGTGACCTTGTAGGTTATTCAGATATTTAG 2820 0.417 MYPSKGCKHGVFVFSLWFCCYLLLAAEQNGITKPTEVEALKAIKISLIDPNGNLSNWDLGDPCTANWTGVLCFNDTLLDGYLHVQELQLLKLNLSGTLAPEIGNLTYMQRLNFMWNNISGSIPKEIGNIKSLQLLLLNGNQLTGPLPEELGYLPVLDRIQIDQNHITGPLPLSFSNLNKTKHFHMNNNSISGQIPPELSRLPSLVHLLLDNNNLSGYLPPELSNLPNLLIVQLDNNNFGGNSIPDSYRNMSKLLKLSLRNCNLTGPIPDLSTIPHLGYLDLSSNQLNGSIPPNKLSENITTIDLSNNKLTGTIPPYFSGLQRLQKLSLANNSLNGSVPSTIWQNKTSNGTEIFLLDFQNNELTSISGNTNLPPNVTLELNGNPLCSNYTLTQFCGSEAAPTDPNGLIPANPNASCPTQACPPPYEYSVDCFCAAPLLVGYRLKSPGFSDFRPYKETFEDYLTSGLDISTDQLQFTFRWQVGPRLSMELKLFPEYVVNSSTHIFNDSELLRITSMFTGWKIPDSDLFGPYELLNFTLLDPYKDVIFTSSKSGSGISKGALAGIVLGSIACAVTLSAIVTIIILRVKLKDHPSKTIIKIDGVRSFTYEEVSSATHNFSNTAQVGQGGYGKVYKGVLQNGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMPNGTLRDHLSATSKEPPNFAIRMKVALGSAKGLAYLHTEADPPIFHRDVKASNILLDSNFTAKVADFGLSRLAPVPDLEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNVAYQSGVIFSVIDERIGSYPSEHVEKFLTLALKCCEDDPEARPRMTEVVRELENIWSMMPESDTKKAESVTSDSGKLFSITSSSSTTKTHFVSGDVSGSDLVGYSDI 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1254 939 Gene3D Ribonuclease Inhibitor 33 188 IPR032675 -
Lal5g1254 939 SUPERFAMILY L domain-like 48 389 - -
Lal5g1254 939 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 13 919 - -
Lal5g1254 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Lal5g1254 939 ProSiteProfiles Protein kinase domain profile. 615 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1254 939 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 919 - -
Lal5g1254 939 Gene3D Transferase(Phosphotransferase) domain 1 691 909 - -
Lal5g1254 939 SMART serkin_6 615 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1254 939 CDD STKc_IRAK 621 887 - -
Lal5g1254 939 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Lal5g1254 939 Gene3D Ribonuclease Inhibitor 189 294 IPR032675 -
Lal5g1254 939 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Lal5g1254 939 SUPERFAMILY Protein kinase-like (PK-like) 600 903 IPR011009 -
Lal5g1254 939 Gene3D Phosphorylase Kinase; domain 1 586 690 - -
Lal5g1254 939 Pfam Leucine rich repeat 156 214 IPR001611 GO:0005515
Lal5g1254 939 Pfam Leucine rich repeat 298 342 IPR001611 GO:0005515
Lal5g1254 939 Pfam Protein kinase domain 617 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1254 939 Gene3D Ribonuclease Inhibitor 295 385 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1254 Lal-Chr5 15272898 15290173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1254 1 897 Receptor kinase-like Gene Family AT5G01950 58.015 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lal5g1254 Pkinase 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1254 - - gmx:100799888 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1254 5 15272898 15290173 Lal5g1254 5 15272898 15290173 ECH