Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1240 ATGGCGGCCGTTGAAGACTCTGCTCCTTCCACTGAACTCGTTCAATCCGTCACTGACGTCAAACTCTTCAATCGGTGGTCCTACGTTGATGTCGCGGCACATGACATATCTCTGTTAGATTACATTGGCGTGGCTGCTCCCAAACATGCAATCTATGTCCCCCACACTGCTGGGAGGTACTCAGCTAAGCGTTTCAGAAAAGCGCAGTGTCCAATCATAGAGAGGCTTACAAACTCTCTTATGATGCACGGAAGAAACAACGGGAAGAAGCTGATGGCAGTGAGGATTGTCAAGCATGCAATGGAAATTATCCACTTGCTCACTGACCTGAACCCATTACAAGTTATTGTTGATGCTGTGGAAAACAGTGGGCCAAGGGAAGATGCTACCAGAATTGGATCTGCTGGTGTTGTTAGACGTCAGGCTGTGGATATTTCTCCTCTCCGACGTGTGAATCAGGCAATCTACCTCCTTACCACTGGTGCACGTGAGGCTGCATTCAGGAACATTAAGACCATTGCGGAATGCTTGGCTGATGAACTTATCAATGCTGCAAAGGGTTCATCAAACAGCTATGCTATCAAGAAGAAGGATGAGATTGAGAGAGTTGCCAAGGCTAACCGTTGA 627 0.4753 MAAVEDSAPSTELVQSVTDVKLFNRWSYVDVAAHDISLLDYIGVAAPKHAIYVPHTAGRYSAKRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPLQVIVDAVENSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1240 208 Pfam Ribosomal protein S7p/S5e 66 208 IPR023798 -
Lal5g1240 208 SUPERFAMILY Ribosomal protein S7 21 208 IPR036823 -
Lal5g1240 208 TIGRFAM uS7_euk_arch: ribosomal protein uS7 20 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lal5g1240 208 Gene3D Ribosomal protein S7 domain 2 208 IPR036823 -
Lal5g1240 208 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
Lal5g1240 208 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 208 IPR000235 GO:0006412
Lal5g1240 208 CDD uS7_Eukaryote 21 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lal5g1240 208 PANTHER RIBOSOMAL PROTEIN S7 7 208 IPR000235 GO:0006412
Lal5g1240 208 PANTHER 40S RIBOSOMAL PROTEIN S5 7 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1240 Lal-Chr5 15148960 15151295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1240 12 208 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 87.374 6.07e-130 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1240 K02989 - csv:101209853 357.066