Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1198 ATGGCCTTCTCCCTCTCATTCCTCACCACCATTTTTCTCACTCTCTCTTCATTTCCTTCCCTCACTCTCTCTTCCTCATCCTCCACTGACTCCTTCGTCTACATCGGTTGCACCCAGCAACATTACACCCCAAACTCCGCTTATGAAACAAACATCAACTCTCTCCTCACCTCACTCACCAACTCAGCCACTTACTCTTCCTACAACCACTTCTCCATTGTGGGAGGCTCTACCTCCCACGATGTCGTCTACGGCCTATACCAATGCCGAGGCGACCTCGCCATGCCAGACTGCGCCACCTGCATCGCCAACGCAGTCACCCGTGTAGGCAACCTATGCCCGCAGGCGTGCGGTGGCGCAGTCCAGCTGGAAGGATGTTACATAAAATATGACAATGCAACTTTCTTGGGGCAAGAGGACAAGACACTGGTGCTTAAAAAGTGCGGGTCGTCGACCGGCTACAACACGGGTGAGAGGGACATGGTGTTGGCTGCATTGGCGGGTTCCAGCGGGGCTTTCCGGGTTGGTGGGTCGGGTCAGGTGAAGGGAATGGCGCAGTGTAGTGGGGATTTGAGTTTTGCGCAGTGTCAGGATTGTGTGGGGGAAGCCATCAAACGGTTGAAGAGTGATTGTGGTGCAACTGATTATGGGGACATGTTCTTGGCTAAGTGTTATGCTAGGTACTCTGCTAATGGGGCCCATGCTTACTCCAACAAATCCCATGGTAAATCAGGCAATGGAGGTGAAAAGAAATTTGCATTAATTATTGGATTATTAGCAGGTGTAGCTATACTTATTATTTTCCTTGTTTTCTTGAGGAGGATTTGTGAAGGACAAGGTAAATAA 846 0.5024 MAFSLSFLTTIFLTLSSFPSLTLSSSSSTDSFVYIGCTQQHYTPNSAYETNINSLLTSLTNSATYSSYNHFSIVGGSTSHDVVYGLYQCRGDLAMPDCATCIANAVTRVGNLCPQACGGAVQLEGCYIKYDNATFLGQEDKTLVLKKCGSSTGYNTGERDMVLAALAGSSGAFRVGGSGQVKGMAQCSGDLSFAQCQDCVGEAIKRLKSDCGATDYGDMFLAKCYARYSANGAHAYSNKSHGKSGNGGEKKFALIIGLLAGVAILIIFLVFLRRICEGQGK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1198 281 Gene3D - 28 135 IPR038408 -
Lal5g1198 281 Gene3D - 145 231 IPR038408 -
Lal5g1198 281 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Lal5g1198 281 Pfam Salt stress response/antifungal 37 132 IPR002902 -
Lal5g1198 281 Pfam Salt stress response/antifungal 173 230 IPR002902 -
Lal5g1198 281 ProSiteProfiles Gnk2-homologous domain profile. 136 233 IPR002902 -
Lal5g1198 281 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 5 277 - -
Lal5g1198 281 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 5 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1198 Lal-Chr5 14755839 14758400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1198 22 229 Pollen Coat Proteome AT4G20670 25.641 2.09e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1198 - - gmx:100811615 367.466