Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1191 ATGGAAAATCTTTTGGGTTTGCTTAGAATTCATGTTGATAAAGGTGTCAACCTTGCTATCAGGGATGTAGTGAGCAGTGACCCTTATGTGATTATCAAAATGGGCAAGCAGAAGCTAAAGACTCGAGTGGTGAAGAAGAATATCAATCCTGAGTGGAATGATGACTTGACTTTGACCATTTCAGATCCTCATCTTCCAGTACATCTATTTGTGTATGATAAAGACAAATTCAGCTTTGATGACAAAATGGGAGATGCAGAGTTTGATATTGCACCATATATTGAAGCAATTAAGATGCACTTGGAAGGCCTCCCGAATGATACCATAATCACAAAATTGCAGCCGAGCCGAGAAAATTGCTTAGCAGAAGAGAGCAAAATTGTGTGGAAAGATGGCAAAGTGGTGCAACATATGGTTCTTAGACTAAGAAATGTTGAGTCTGGTGAAGTGGAGTTACAATTGCATTGGATTGACATTCCTGGTTCTAGGGGTCTTTAA 498 0.3936 MENLLGLLRIHVDKGVNLAIRDVVSSDPYVIIKMGKQKLKTRVVKKNINPEWNDDLTLTISDPHLPVHLFVYDKDKFSFDDKMGDAEFDIAPYIEAIKMHLEGLPNDTIITKLQPSRENCLAEESKIVWKDGKVVQHMVLRLRNVESGEVELQLHWIDIPGSRGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1191 165 CDD C2_ArfGAP 5 148 - -
Lal5g1191 165 Gene3D C2 domain 3 163 IPR035892 -
Lal5g1191 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Lal5g1191 165 Pfam C2 domain 6 92 IPR000008 -
Lal5g1191 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Lal5g1191 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lal5g1191 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
Lal5g1191 165 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1191 Lal-Chr5 14665511 14668472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1191 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 5.97e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1191 - - pvu:PHAVU_001G230800g 288.5