Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1170 ATGTTATATCATATTTATCTGCTTCAATCCAATTCTATTATGGCAAAAATACAAGTACTTTTCTTAATTCTCATTCTAGCCTCAAACCTTGTAATATCTAAGCAACAAGAGCTTTTATTTGAAGGGTTTCGTGCTTCTGACACCAATATAAGTTTATATGGAAGTGCAGTGATTGAAAACAATGGTTTACTTAGTCTCACAAGTGACAAACCCAGATTAATTGGTCATGCTTTTTATCAAACACCAATTCAGTTCAAGAAAAACTCATCATCTAAAGTTCTCTCCTTTTCAACATCTTTTGTATTTTCAATCAGACCCCAATATCCAAAACTAGGTGGCCATGGCTTTGCATTCACAATTTCACCTTCCAAAACTCTTGAAGGTGCATATCCTCTTCAGTACTTAGGCCTTCTAAACCCAAATAATTTAGGCAATTTCTCAAACCACATTTTTGCAGTGGAATTTGACACTGTCCAAGACTATGAACTTCATGACATCAATAATAATCATGTTGGTATCAACATAAACAACATGGTATCAGAAAAATCTGTTAAAGCTGAGTTTTTTAGAGAAGGGTCAAGGGAAAAATTACAAGATATAAATTTGTTGAATGGGAATGTGATTCAAGCAATGGTTGATTATGACTCAACTAGGAATAAATTAGAAGTTAGGCTTTCACCATATTCTTCAAAGCCCAAATATCCAATTTTGTCCTATGAAGTAGATCTCTCACCAATTCTACATGATCAAATGTATGTTGGGTTCTCTTCTTCAACAGGAATGCTTTCAAGTTGGCACTATATATTAGGTTGGAGGTTCAAAATCAATGGAGAGAGCAAAACACTTGATTTTGAAACATTGCCTTTACTCCCTACATCAAAAAACACTAGTAATGAGTCCTTAATCATAGAACTCTCTCTTTCTTCTTTGATTCTTTTACTTTTGTTAATTGGGTTAATAATTTTCATTATCAGAAAGATAAGGAACACTGATCATGATGTGGTTGAAGCATGGGAACTTGAAATTGGTCCACACAGATTCTCATACAAAGATTTGAAAAAAGCCACTAATGGCTTTGATGACAATCAATTGCTAGGGTTTGGTGGATTTGGTAGAGTCTACAAAGGTGTTCATCCAAATTCCAACACTGAAATTGCTGTGAAGGGAGTCTCACATGAATCAAAACAAGGGTTGCAAGAATTTATGTCAGAAATTGAAACCATTGGTAAGCTTCGTCATAGAAACCTAATCCAGTTACTTGGTTGGTGTAGAAAACAACGTGAGTTACTTTTAGTTTATGAATTCATGCATAATGGAAGCTTGGATAAATACATATTTGGTAGACCAAGAATAACACTGAGCTGGGAACAAAGGTTTAACATCATAAAGGGTGTGGCTTCAGGAATTCTATATCTCCATGAAGAGTGGGAGCAAGTTGTGATCCACAGAGACATAAAAGCAGGTAACGTGTTGTTGGATTCGGAGATGAATGGGAAGCTTGGTGACTTTGGGTTAGCAAGGTTGTATGAGCATGGTTCAAATCCAAACACAACAAGGGTAGTTGGAACAATAGGGTACGTTGCCCCAGAGTTAACACGCACGAACAAACCTACAACAAGTTCTGATGTGTATGCATTTGGAATGTTACTATTGGAGACGGTGTGTGGGAGGAGATCGGTGGAGACGAAGGCGGAGCCGGAGGAGTTGGTTCTGGTGGACTTGGTGTGGGAACAGTGGCGGCTGGGGGCAATGTTGGGGATGGTGGACCCAAAATTAGATGGGTCGTTCAATGAGGTGGAGGTGGTGATGGTGATGAAGCTAGGGTTGGTGTGTTCGAACGAGAAATTAGAGTTAAGACCAACAATGAGGCAGGTGATTCAGTACTTGGATGGTGAAGTATCGCTACAAGAGTCGATATCGATACTTCATCGGGTTGGTGCGATAAAAGAAGATACTAATGATGATAGGTGA 1971 0.381 MLYHIYLLQSNSIMAKIQVLFLILILASNLVISKQQELLFEGFRASDTNISLYGSAVIENNGLLSLTSDKPRLIGHAFYQTPIQFKKNSSSKVLSFSTSFVFSIRPQYPKLGGHGFAFTISPSKTLEGAYPLQYLGLLNPNNLGNFSNHIFAVEFDTVQDYELHDINNNHVGININNMVSEKSVKAEFFREGSREKLQDINLLNGNVIQAMVDYDSTRNKLEVRLSPYSSKPKYPILSYEVDLSPILHDQMYVGFSSSTGMLSSWHYILGWRFKINGESKTLDFETLPLLPTSKNTSNESLIIELSLSSLILLLLLIGLIIFIIRKIRNTDHDVVEAWELEIGPHRFSYKDLKKATNGFDDNQLLGFGGFGRVYKGVHPNSNTEIAVKGVSHESKQGLQEFMSEIETIGKLRHRNLIQLLGWCRKQRELLLVYEFMHNGSLDKYIFGRPRITLSWEQRFNIIKGVASGILYLHEEWEQVVIHRDIKAGNVLLDSEMNGKLGDFGLARLYEHGSNPNTTRVVGTIGYVAPELTRTNKPTTSSDVYAFGMLLLETVCGRRSVETKAEPEELVLVDLVWEQWRLGAMLGMVDPKLDGSFNEVEVVMVMKLGLVCSNEKLELRPTMRQVIQYLDGEVSLQESISILHRVGAIKEDTNDDR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1170 656 CDD STKc_IRAK 365 631 - -
Lal5g1170 656 Pfam Legume lectin domain 38 285 IPR001220 GO:0030246
Lal5g1170 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Lal5g1170 656 Pfam Protein kinase domain 360 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1170 656 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
Lal5g1170 656 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 20 643 - -
Lal5g1170 656 CDD lectin_legume_LecRK_Arcelin_ConA 40 277 IPR001220 GO:0030246
Lal5g1170 656 Gene3D - 36 276 - -
Lal5g1170 656 PANTHER - 20 643 - -
Lal5g1170 656 SUPERFAMILY Protein kinase-like (PK-like) 340 633 IPR011009 -
Lal5g1170 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 292 IPR013320 -
Lal5g1170 656 ProSiteProfiles Protein kinase domain profile. 359 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1170 656 Gene3D Transferase(Phosphotransferase) domain 1 436 645 - -
Lal5g1170 656 Gene3D Phosphorylase Kinase; domain 1 344 435 - -
Lal5g1170 656 SMART serkin_6 359 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1170 Lal-Chr5 14421353 14424637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1170 36 639 Receptor kinase-like Gene Family AT3G55550 57.471 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal5g1170 Pkinase 9.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1170 - - gmx:100787552 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2198 1 23960285 23962342 Lal5g1170 5 14421353 14424637 ECH
Lal9g1607 9 18379329 18381347 Lal5g1170 5 14421353 14424637 ECH
Lal5g1170 5 14421353 14424637 Lal5g1170 5 14421353 14424637 ECH