Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1153 ATGCAGACCTACATTGTCTATACTGGCAGCAACATTAAAGATGAATCTTCTGCATTGTCCTTTTACACAAGCATGCTACAAGAAGTTGCAGATAGCAATGCTAAGCCTAAATCAGTAATGCACCATTACAAGCGTAGTTTCGGTGGCTTCATTGTGAAGCTGACAGAGGAAGAAGCTGATAGAATGGCTGAACTTGATGGAGTAGTGTCTGTGTTTCCTAATGAAAAGAAACAGCTTCATACAACAAGATCTTGGGATTTTATCGGCTTTCCGCAACAAGTGAAAAGAGAAACAACTGAAAGTGATGTTATCATTGGAGTAATTGACACAGGAATCTGGCCAGAATCTTATAGTTTTGATGATAAAGGATTTGGTCCACCACCTAGTAAATGGAAGGGAACTTGTCAAACATATAATTTCACATGCAATAATAAAATCATTGGTGCTAAGTGTTATAGAACTGAAATTGATGATTCATTCCCACTTGAAGATCTAAAATCTCCAAGAGATGCAATTGGTCATGGGACTCATACTGCATCGACAGCAGCTGGGAACCCAATAGGCATGGCGAGTTTGTTAGGCCTTGGACAAGGAACAGCAAGAGGCGGCGCACCATCGGCACGCATTGCCGTCTATAAAGTGTGTTGGGAGGAGGATTGTGCTGGAGTAGACATACTTGCTGCATTTGACGATGCAATCGCGGACGGGAAATGGAGTATTGACAGCACTTTCAGCAGGGAACAAGGTCCAACACTTTCATCCCTGTCAAATTTTTCGCCTTGGTCAGTTTCCGTGGCTGCTAGCACCATAGACAGGAAATTTGTTACCAAAGTTGAATTAGGTGACAACAAAACTTTTGAGGGAACCTCATTAAATACATTTGATCTAAAGGGAAAGTTGTATCCCATAATCTATGGTGGAGATGCACCAAATACTAAAGGAGGCATTGATGGATCTGTATCCAGGTTTTGCTTGAAGGGCACATTGGATAAAAAATTAGTTAAGGGTAAAATTGTTCTCTACGACGGTGAAACAAGCGCAAAAGGTGCTTTTCTTGATGGCGCTGTTGGGGCCCTGATGGAGACTCAATATTTCAAAGATGTTAACCGTGTTGTTTCGCTGCCTGCATCTTACCTTGACTTGCAGGATGGTGCATATGTATATAACTACATAAACTCTACAAGAACTCCAACTGCAACTATATTCAAGAGCGAAGAGTTAAAAGATACTTCGGCCCCTATTGTGGTCTTTTTCTCATCAAGGGGTCCAAATCTTGTTACACCTGAAATTCTCAAGAGTTACGACATCAGCATCCTTCAGAGGATTGGCATTGGTCAAACATTCTCAGTCATGCCGGATATAACCGCTCCTGGAGTGAACATTCTAGCAAGTTGGACTCCAATTTCCCATCCACATGTTGAAAGTGATGATAGAACATTGTTGTTCAACATTATTTCAGGAACATCAATGTCTTGCCCTCATGTTTCTGGGGTGGCTGCATACATTAAATCATTTCATCCAACATGGTCCCCTGCCGCTATTCGTTCAGCTCTAATGACAACAGCTACACAGCTTAGTCCAAAGACTAACCGAGATGCCGAATTTGCATATGGAGCAGGCCAAATTGATCCTTCCAAGGCTATTAATCCTGGTTTAGTATATGAAGCTAATGAAATAGACTATGTAAGGTTTTTATGTGGACAAGGTTATAGTACAAGGACTTTACAACTCATAACAGGTGACAATAGTAGCTGCACTGAAACTACTTATAAAACAGCAAGGGATCTAAACTATCCTTCATTTGCTCTTTCTGTCTTACCCTCCAAAACCAGTGTAAGTGGCAGTTTTAATAGGACTGTTACAAATGTTGGGTTATCATCATCTACATATAAAGCTATTGTGAATGCTCCTCAAGGACTAAAAATTAAGGTACACCCTAATGTTTTATCGTTCAATTATGTTGGACAAAAGCAAAAATTTGTGCTTACTATTGAGGGAACACTAGAGGAATATATAGTATCAGGTTCTTTGGTTTGGGATGATGGCAAATTCCAAGTTAGGAGTCCCATTGTTGTGTTTAATGCACCATAA 2091 0.4046 MQTYIVYTGSNIKDESSALSFYTSMLQEVADSNAKPKSVMHHYKRSFGGFIVKLTEEEADRMAELDGVVSVFPNEKKQLHTTRSWDFIGFPQQVKRETTESDVIIGVIDTGIWPESYSFDDKGFGPPPSKWKGTCQTYNFTCNNKIIGAKCYRTEIDDSFPLEDLKSPRDAIGHGTHTASTAAGNPIGMASLLGLGQGTARGGAPSARIAVYKVCWEEDCAGVDILAAFDDAIADGKWSIDSTFSREQGPTLSSLSNFSPWSVSVAASTIDRKFVTKVELGDNKTFEGTSLNTFDLKGKLYPIIYGGDAPNTKGGIDGSVSRFCLKGTLDKKLVKGKIVLYDGETSAKGAFLDGAVGALMETQYFKDVNRVVSLPASYLDLQDGAYVYNYINSTRTPTATIFKSEELKDTSAPIVVFFSSRGPNLVTPEILKSYDISILQRIGIGQTFSVMPDITAPGVNILASWTPISHPHVESDDRTLLFNIISGTSMSCPHVSGVAAYIKSFHPTWSPAAIRSALMTTATQLSPKTNRDAEFAYGAGQIDPSKAINPGLVYEANEIDYVRFLCGQGYSTRTLQLITGDNSSCTETTYKTARDLNYPSFALSVLPSKTSVSGSFNRTVTNVGLSSSTYKAIVNAPQGLKIKVHPNVLSFNYVGQKQKFVLTIEGTLEEYIVSGSLVWDDGKFQVRSPIVVFNAP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1153 696 SUPERFAMILY Subtilisin-like 79 552 IPR036852 GO:0004252|GO:0006508
Lal5g1153 696 Gene3D Peptidase S8/S53 domain 102 236 IPR036852 GO:0004252|GO:0006508
Lal5g1153 696 Gene3D Peptidase S8/S53 domain 248 561 IPR036852 GO:0004252|GO:0006508
Lal5g1153 696 Pfam Fibronectin type-III domain 595 692 IPR041469 -
Lal5g1153 696 ProSitePatterns Serine proteases, subtilase family, serine active site. 487 497 IPR023828 -
Lal5g1153 696 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Lal5g1153 696 PRINTS Subtilisin serine protease family (S8) signature 170 183 IPR015500 -
Lal5g1153 696 PRINTS Subtilisin serine protease family (S8) signature 486 502 IPR015500 -
Lal5g1153 696 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 245 693 IPR045051 -
Lal5g1153 696 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 237 IPR045051 -
Lal5g1153 696 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 80 IPR037045 -
Lal5g1153 696 Gene3D - 565 694 - -
Lal5g1153 696 CDD Peptidases_S8_3 77 523 IPR034197 -
Lal5g1153 696 Pfam Subtilase family 438 540 IPR000209 GO:0006508|GO:0008236
Lal5g1153 696 Pfam Subtilase family 101 236 IPR000209 GO:0006508|GO:0008236
Lal5g1153 696 CDD PA_subtilisin_like 278 401 - -
Lal5g1153 696 Pfam Peptidase inhibitor I9 3 80 IPR010259 -
Lal5g1153 696 ProSiteProfiles Serine proteases, subtilase domain profile. 84 548 - -
Lal5g1153 696 PANTHER PUTATIVE-RELATED 245 693 - -
Lal5g1153 696 PANTHER PUTATIVE-RELATED 2 237 - -
Lal5g1153 696 Gene3D - 271 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1153 Lal-Chr5 14268689 14272420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1153 2 693 Subtilisin-like Serine Gene Family AT3G46850 46.259 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1153 - - gmx:100795826 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1153 5 14268689 14272420 Lal5g1153 5 14268689 14272420 ECH