Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1152 ATGTTCAAATCTCTTCTTCATCTCAAGACTATAATCTCTACCACATTCCAAATCACTTCACCTATATCTTTTCATTCCTCATTTTCTCATCGATTCTTCACAACCACTTCCACTACAAAACTTCCAAAACGACCCCGTTTCACTACCTCACAGAACCCAGATCCATTTCTCGTTTTCTTCAGAAGCCATGGTTTTTCACTTTCTCAGGTCAATAGCATTCTCACAAAGTCACCACGGTTGATTTCGTGCAATACCCATGAACTTATTTTGCCAAAGTTTGAATTTTTATCCTCCAAAGGTGCTTCCAAATCTGAAATTGTTCTTGCTGTTACTAAGAACCCTAATTTCCTACGTTCAAGCATAGATGATAAGATAATCCCTATGTATGAATTGATTAGGAGATTCTTTAAATCTGATAAGGAAGCCCTTAATTATTTCATTAGTTGGCCTGCTTTATTGCAAAAGAAGAAGGTTGTGGAGCAAGTTTTCAAAATTTTGTGTGATGAAGGAGTGAAGCATTCACACATTGCTTATTTGATTCGTATGAGATCTTGTGTACTTCGCTCTGGTGAATTGAGGAAAGCTGTGGATGAAGTAAAGGAATTAGGATTCGATCCTTCGAAATCGGAATTCGTTACAGCACTGGCAGCCAAAGTGAGTGTGTCCAAAACCAAATGGAATGAAAAAGTTGATGCCTTTAAGAGTTGGGGTTGGTCTGAAGAAACAATTGCTGCGGCATTCAAGAGGCATCCGCGTTGTATGCTGGCATCGAAGGATAAAATTAACGCGATCATGAGCTTTTGGGTCAATCAATTAGGTTGGAATTCATTGGAGATTGCCATGTTTCCAGCTATTCTTGGATATAGTTTGGAGAAAAGGATCATTCCTAGGACTTCTGTGGTGCAGTGTTTACTCACATTAGGTTTGATGAAGAATAATGCCAGCTTATATTCACCTTTTGTCATGTCTGAAAAGTTGTTCCTTGAAAGGTATGTGAAAAAATTTGAGAAGGAAAGTTTTCAGCTTTTAAAGCTATACCATGGAGAAAGAAAATTTTGA 1059 0.3787 MFKSLLHLKTIISTTFQITSPISFHSSFSHRFFTTTSTTKLPKRPRFTTSQNPDPFLVFFRSHGFSLSQVNSILTKSPRLISCNTHELILPKFEFLSSKGASKSEIVLAVTKNPNFLRSSIDDKIIPMYELIRRFFKSDKEALNYFISWPALLQKKKVVEQVFKILCDEGVKHSHIAYLIRMRSCVLRSGELRKAVDEVKELGFDPSKSEFVTALAAKVSVSKTKWNEKVDAFKSWGWSEETIAAAFKRHPRCMLASKDKINAIMSFWVNQLGWNSLEIAMFPAILGYSLEKRIIPRTSVVQCLLTLGLMKNNASLYSPFVMSEKLFLERYVKKFEKESFQLLKLYHGERKF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1152 352 Pfam mTERF 57 217 IPR003690 GO:0003690|GO:0006355
Lal5g1152 352 Pfam mTERF 215 327 IPR003690 GO:0003690|GO:0006355
Lal5g1152 352 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 24 348 - -
Lal5g1152 352 Gene3D Transcription termination factor 3, mitochondrial 137 344 IPR038538 -
Lal5g1152 352 PANTHER CGI-12 PROTEIN-RELATED 24 348 IPR003690 GO:0003690|GO:0006355
Lal5g1152 352 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Lal5g1152 352 SMART mt_12 71 102 IPR003690 GO:0003690|GO:0006355
Lal5g1152 352 SMART mt_12 177 205 IPR003690 GO:0003690|GO:0006355
Lal5g1152 352 SMART mt_12 143 172 IPR003690 GO:0003690|GO:0006355
Lal5g1152 352 SMART mt_12 276 310 IPR003690 GO:0003690|GO:0006355
Lal5g1152 352 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Lal5g1152 352 SMART mt_12 209 239 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1152 Lal-Chr5 14264145 14265203 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal5g1152 mTERF 4.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1152 K15032 - gmx:102667698 315.079