Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1130 ATGGCTGTGAAACAAACAAAGGCACAGAAGAAAATAGCATATGACGCGAAACTATGCAAGCTTTTAGACAATTATACTCAGATTCTTGTGGTGGCCGCAGACAACGTTGGATCTAACCAGCTTCAAAACATTCGACAAGGTCTTCGCGGTGACTCTGTTATTCTGATGGGAAAGAACACTATGATGAAACGTTCTATCAGAATTCATTCCGAGAGTACTGGAAATGAAACCTTCCTCAACCTTATTCCCCTCCTTGCTGGTAATGTGGGGTTGATTTTCACAAAAGGTGACTTGAAGGAGGTTAGCGAAGTGGTTAGCAAGTACAAGGTAGAGTGGCTATTCTGCTACATTTTTTATAGTGCCAATATCATTGTTAAAGACGAGGTGGGAGCTCCTGCACGTGTTGGTTTGGTTGCTCCAATTGATGTCATTGTTCCTCCAGGAAACACAGGACTTGACCCCTCTCAGACCTCTTTCTTCCAGGTGCTTAATATTCCTACCAAGATTAACAAGGGTACTGTGGAAATCGTCACTCCTGTGGAACTGATTAAGAAGGGAGAAAAAGTTGGTTCTTCTGAGGCTGCTCTACTTGCAAAACTTGCGATAAGGCCTTTCTCATATGGGCTTATTGTGGTTTCTGTTTATGATAATGGTTCAGTGTTTAGCCCTGAAGTTCTTGATTTAACTGAGGATGATCTCGTTGGGAAGTTTGCTATTGGTATTTCTATGGTTGCTTCACTTTCCTTGGCTATCTCGTACCCAACAATTGCAGCAGCACCACATATGTTTGTCAATGCCTATAAGAATGTTCTCTCTGTTGCACTTGCAACTCAATATTCTTTCCCCCAGGCAGATGAGGTTAAGGAGTACCTCAAGAATCCTAGTAAATTTGCTGTAGCTGCACCTGCTGCTGTTTCTGCCACTGCTCCAGCTGCTGCTACTGCTGCCAAGGAGGAAAAGAAGGAAGAGCCAGCTGAAGAATCTGATGATGACTTGGGTTTAAGCTTGTTTGATTAA 1017 0.4297 MAVKQTKAQKKIAYDAKLCKLLDNYTQILVVAADNVGSNQLQNIRQGLRGDSVILMGKNTMMKRSIRIHSESTGNETFLNLIPLLAGNVGLIFTKGDLKEVSEVVSKYKVEWLFCYIFYSANIIVKDEVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIVTPVELIKKGEKVGSSEAALLAKLAIRPFSYGLIVVSVYDNGSVFSPEVLDLTEDDLVGKFAIGISMVASLSLAISYPTIAAAPHMFVNAYKNVLSVALATQYSFPQADEVKEYLKNPSKFAVAAPAAVSATAPAAATAAKEEKKEEPAEESDDDLGLSLFD 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1130 338 CDD Ribosomal_P0_L10e 9 204 - -
Lal5g1130 338 SUPERFAMILY Ribosomal protein L10-like 8 115 IPR043141 -
Lal5g1130 338 MobiDBLite consensus disorder prediction 324 338 - -
Lal5g1130 338 Pfam 60s Acidic ribosomal protein 253 337 - -
Lal5g1130 338 Gene3D - 130 204 IPR043164 -
Lal5g1130 338 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 110 - -
Lal5g1130 338 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 124 338 - -
Lal5g1130 338 Gene3D - 6 228 IPR043141 -
Lal5g1130 338 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 124 338 - -
Lal5g1130 338 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 110 - -
Lal5g1130 338 MobiDBLite consensus disorder prediction 312 338 - -
Lal5g1130 338 Pfam Insertion domain in 60S ribosomal protein L10P 133 202 IPR040637 -
Lal5g1130 338 PIRSF L10E 118 338 IPR030670 GO:0042254
Lal5g1130 338 PIRSF L10E 1 112 IPR030670 GO:0042254
Lal5g1130 338 Pfam Ribosomal protein L10 8 108 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1130 Lal-Chr5 14034099 14038318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1130 1 337 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 73.887 1.47e-175 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1130 K02941 - jre:108991896 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1130 5 14034099 14038318 Lal5g1130 5 14034099 14038318 ECH
Lal5g1130 5 14034099 14038318 Lal18g1365 18 16014035 16016439 LSH