Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1126 ATGGCCACCGCCGCTGCCACCTCATACTTCTTCGGCACCCGTCTCAATAATCCAGCCTCAAATTCCGGAAAGTTCCAAGCCTTCTTCAACCTTGGCATCAAAAAGAAACCAGCACCCAAGAAAAAGGAGGTGAAGGTTAAACCCAGTTCCGACGGACTCGTGTGGTTCCCGGGTGCTCAAGCACCCGAGTGGCTAGACGGATCACTGGTCGGTGACCGCGGTTTCGACCCATTAGGGTTCGCAAAACCTGCAGAATATTTGCAGTTTGATCTTGACTCGTTGGACCAGAACCTGGCGAAAAACCTCGCTGGTGATATCATCGGAACCAGGGTGGAGACCACGGAGGTCAAACCGACACCGTTTCAGCCTTACACGGAGGTTTTTGGGCTGCAGAGATTCCGTGAGTGTGAGGTCATTCATGGAAGGTGGGCCATGCTTGGTGCTCTTGGTGCTCTTGCTGTTGAAGCCTTCACTGGTGTTGCATGGCAAGACGCTGGAAAGGTAGAGCTGGTGGAAGGGTCATCCTACTTTGGACTTCCTCTTCCATTCTCAATTACCTCATTGATATGGATAGAGGTATTAGTGATAGGATACATTGAATTCCAAAGAAATGCAGAACTTGATCCAGAGAAAAGGTTATACCCTGGAGGCAAGTTCTTTGATCCATTAGGATTGGCCAAAGACCCTGAAGAAAAAGAAAGACTTCAACTTGCAGAAATCAAACATTCACGCTTAGCCATGGTGGTCTTTCTCACCTTTGCAATCCAAGCAGCTATAACTGGAAAAGGCCCTATCAGTTTTATTGCTACCTTCAACAAGTGA 822 0.4842 MATAAATSYFFGTRLNNPASNSGKFQAFFNLGIKKKPAPKKKEVKVKPSSDGLVWFPGAQAPEWLDGSLVGDRGFDPLGFAKPAEYLQFDLDSLDQNLAKNLAGDIIGTRVETTEVKPTPFQPYTEVFGLQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGLPLPFSITSLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAKDPEEKERLQLAEIKHSRLAMVVFLTFAIQAAITGKGPISFIATFNK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1126 273 Pfam Chlorophyll A-B binding protein 61 257 IPR022796 -
Lal5g1126 273 Gene3D Chlorophyll a/b binding protein domain 52 273 - -
Lal5g1126 273 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 273 IPR001344 GO:0009765|GO:0016020
Lal5g1126 273 SUPERFAMILY Chlorophyll a-b binding protein 50 270 - -
Lal5g1126 273 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 2 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1126 Lal-Chr5 14014440 14017473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1126 10 270 Chloroplast and Mitochondria Gene Families AT3G08940 71.756 1.28e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1126 K08915 - gmx:100820335 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0589 3 4456013 4458938 Lal5g1126 5 14014440 14017473 LSH