Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1112 ATGGAAGGCCAATCAGCTAAACGAAGACGTGTTTACTCACTTGAACCCAACAAAATGGTGCAAGCAGTGCTTGCTAGAAACTATGTAAGCTATTTAGTTCCTGCATTGGTGAAGATCAAGGAAAGTGGTTCTGATAGACACAACAAACCTTGTGATTTTCAGAATGTTGTTAAGCATGAAGTGGGCATGGCAATGGTCTTCTCAGCCCAAGGTTTTGCATGGAGTGATGCTCTAAAAGTGAAGCTTCTAAAGGGACATGAGGCTAGTGATGATAAAGGTTCATCATTGAATATTTATGAATCAAATTCAAACCCTAGTTCAAAGTCTAAGTACATTGACATGCCAGAAAATAAGAAAAAGGGTTTAGAAGGAGAAGATAATGAAGATGAGGTCATCAATAACAAGTTGAGGTACCTAAGAAGGTTGATACCTGGAGGAGAAAAGATGTGTAATGAACAAATGGCTGTGGAACTAGAGAGCTATATAAGCTGTTTGCAAATGCAGGTGAATGTTCTTCAATGCCTCACAAAGACACCTTGA 540 0.3907 MEGQSAKRRRVYSLEPNKMVQAVLARNYVSYLVPALVKIKESGSDRHNKPCDFQNVVKHEVGMAMVFSAQGFAWSDALKVKLLKGHEASDDKGSSLNIYESNSNPSSKSKYIDMPENKKKGLEGEDNEDEVINNKLRYLRRLIPGGEKMCNEQMAVELESYISCLQMQVNVLQCLTKTP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1112 179 MobiDBLite consensus disorder prediction 112 126 - -
Lal5g1112 179 CDD bHLH_AtIBH1_like 122 176 IPR044549 GO:0006355
Lal5g1112 179 MobiDBLite consensus disorder prediction 94 111 - -
Lal5g1112 179 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 178 IPR044660 GO:0006355
Lal5g1112 179 MobiDBLite consensus disorder prediction 88 126 - -
Lal5g1112 179 PANTHER TRANSCRIPTION FACTOR BHLH146 3 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1112 Lal-Chr5 13742161 13742700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1112 1 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 37.640 1.12e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1112 - - aprc:113852314 212.231