Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1111 TGGTGTTGTGAGACTCACTCATTTCATGTTTATTTCTTTCTTTCTTGGGATGCTAAAATCTCATTCAATAACCCTTTAATCTTTTCTATCACTCTCAACAAAAACCTTGTCTTCATTACAAGCTCAACAAACATGGCCAGTGGCAAGGGAATCTCACTGGAAGAGATCAAGAATGAAACTGTTGATCTGGAACGTGTTCCTATTGAGGAAGTTTTCCAGCAACTAAAATGTACCAAGGAAGGTTTGTCCTCAGGGGAAGGAGCCAACAGGCTAGAAATATTTGGACCAAACAAGCTAGAAGAGAAGAAGGATAGCAAATTTCTCAAGTTTCTTGGGTTCATGTGGAATCCCCTATCATGGGTCATGGAACTTGCAGCTATAATGGCAATTGCTCTTGCCAATGGTGAAGGAAAGCCACCAGATTGGCAAGATTTTGTGGGTATTATTTGCTTGTTGGTGATCAACTCTACTATCAGTTTCATTGAAGAAAATAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGTCTTGCTCCTAAAACAAAGATCATGATCCTGTGTGGTCTCAAGGAGGATGCTAAGAAGAAGGTTCACGCAATTATTGACAAGTTCGCAGAGAGAGGGCTTCGTTCTCTTGCTGTAGCTAGACAGGAAGTTCCTGAGAAAGCAAAAGAAAGTGCTGGTGGTCCATGGCAGTTTGTTGGTTTGTTGTCACTGTTTGATCCTCCAAGGCATGATAGTGCTGAAACCATTAGTAAAGCTCTTAATCTTGGTGTTAATGTTAAGATGATTACCGGTGATCAACTCGCCATAGCTAAGGAGACTGGCCGAAGACTTGGTATGGGGACGAATATGTATCCATCTTCTTCCTTGCTTGGTCAACACAAAGATGAGAGTATTGCCTCAATTCCCGTAGAAGAGCTTATTGAGAAGGCAGATGGATTTGCTGGAGTTTTTCCAGAGCACAAATATGAAATTGTAAAGAAGTTACAAGAGAGGAAGCACATTTGTGGCATGACTGGCGATGGTGTCAACGATGCTCCTGCTTTGAAGAAGGCTGATATTGGAATTGCTGTTGCTGATGCCACTGATGCTGCAAGAAGTGCTTCTGACATTGTCTTGACAGAACCTGGATTGAGTGTTATTATTAGTGCAGTCTTAACTAGCAGAGCTATTTTCCAAAGAATGAAGAACTACACGATCTATGCAGTATCTATCACTATTCGTATAGTGTTTGGTTTCATGTTTATTGCGTTGATATGGAAATTTGACTTCTCTCCTTTCATGGTTTTGATCATTGCCATTTTGAATGACGGAACAATCATGACAATTTCAAAGGACAGGGTTAAACCATCTCCATTGCCTGATAGCTGGAAACTGAAAGAAATATTTATTACTGGGATTATGCTTGGAGGTTACATGGCTCTAATGACTGTTATATTCTTCTGGGCAATGAAGGAAACAACTTTCTTCTCTGTAAGAACAATATTAATTTCGGATATTCATCATAGCAAATTTGGTGTTAGACCTATACATGAAAACAACAATGAAATGACAGCTGCTCTATATCTACAAGTTAGTATAGTTAGCCAGGCTCTTATATTTGTAACCCGTTCTCGTAGCTGGTCCTTCGTCGAACGCCCTGGAATGCTGTTAATGGGAGCTTTCCTAATTGCTCAACTTATTGCTACACTAATAGCAGTATATGCTAATTGGAGCTTTGCAAAGATCAAAGGAGTTGGTTGGGGTTGGGCAGGAGTAATCTGGCTCTACAGTCTTGTCTTCTATTTTCCACTCGACATCATAAAGTTCGCGATCCGCTACATCTTGAGTGGCAAAGCTTGGATAAATATGCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAAGAAGAGAGAGAAGCTCAATGGGCTCATGCTCAAAGGACCCTGCATGGTCTTCAACCACCAGAGACTTCTAATATTTTCAATGAAAAGAGCAATTACAGAGAACTTTCTGAGATTGCTGAACAGGCCAAAAGACGCGCTGAAGTTGCAAGGCTTCGCGAGCTTCACACGCTTAAGGGACACGTTGAATCCGTGGTAAAGCTAAAAGGTCTAGATATTGATACAATCCAGCAACACTATACTGTGTGA 2145 0.4098 WCCETHSFHVYFFLSWDAKISFNNPLIFSITLNKNLVFITSSTNMASGKGISLEEIKNETVDLERVPIEEVFQQLKCTKEGLSSGEGANRLEIFGPNKLEEKKDSKFLKFLGFMWNPLSWVMELAAIMAIALANGEGKPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKIMILCGLKEDAKKKVHAIIDKFAERGLRSLAVARQEVPEKAKESAGGPWQFVGLLSLFDPPRHDSAETISKALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQHKDESIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFITGIMLGGYMALMTVIFFWAMKETTFFSVRTILISDIHHSKFGVRPIHENNNEMTAALYLQVSIVSQALIFVTRSRSWSFVERPGMLLMGAFLIAQLIATLIAVYANWSFAKIKGVGWGWAGVIWLYSLVFYFPLDIIKFAIRYILSGKAWINMLENKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPETSNIFNEKSNYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1111 714 SMART Cation_ATPase_N_a_2 62 134 IPR004014 -
Lal5g1111 714 Gene3D - 112 166 - -
Lal5g1111 714 Coils Coil 665 685 - -
Lal5g1111 714 PANTHER CALCIUM-TRANSPORTING ATPASE 182 694 - -
Lal5g1111 714 PANTHER CALCIUM-TRANSPORTING ATPASE 48 184 - -
Lal5g1111 714 Gene3D - 80 183 - -
Lal5g1111 714 Gene3D - 184 240 IPR023299 GO:0000166
Lal5g1111 714 PRINTS H+-transporting ATPase (proton pump) signature 197 215 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal5g1111 714 PRINTS H+-transporting ATPase (proton pump) signature 312 328 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal5g1111 714 PRINTS H+-transporting ATPase (proton pump) signature 340 356 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal5g1111 714 PRINTS H+-transporting ATPase (proton pump) signature 371 396 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal5g1111 714 PRINTS H+-transporting ATPase (proton pump) signature 523 544 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal5g1111 714 Gene3D - 663 714 - -
Lal5g1111 714 SUPERFAMILY HAD-like 232 386 IPR036412 -
Lal5g1111 714 PANTHER PLASMA MEMBRANE ATPASE 48 184 - -
Lal5g1111 714 PANTHER PLASMA MEMBRANE ATPASE 182 694 - -
Lal5g1111 714 Gene3D - 378 578 - -
Lal5g1111 714 PRINTS P-type cation-transporting ATPase superfamily signature 235 246 - -
Lal5g1111 714 PRINTS P-type cation-transporting ATPase superfamily signature 257 267 - -
Lal5g1111 714 PRINTS P-type cation-transporting ATPase superfamily signature 340 359 - -
Lal5g1111 714 PRINTS P-type cation-transporting ATPase superfamily signature 363 375 - -
Lal5g1111 714 Pfam Cation transporter/ATPase, N-terminus 66 128 IPR004014 -
Lal5g1111 714 Gene3D - 241 377 IPR023214 -
Lal5g1111 714 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 315 429 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal5g1111 714 Pfam haloacid dehalogenase-like hydrolase 232 354 - -
Lal5g1111 714 SUPERFAMILY Calcium ATPase, transmembrane domain M 62 610 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1111 Lal-Chr5 13707643 13716683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1111 178 714 Primary Pumps ATPases AT2G24520 80.633 0.0 908
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1111 K01535 - gmx:100804422 936.791