Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1099 ATGCTAATACTAATATCAAATTTTCATTTCAGTTTTGCAATGGTTGAAAATATGAAGAGAAGCAAATTTGAAGTGTTGGGACTGTGTTGTGCTACAGAAGCAGAACTGATTGAAAGAATTCTGAAGCCTCTTAATGGAGTCAACGATATTTCGGTGACAGTACCAACCAGAACAGTTACCGTGACCTATAATGTTCTCTTTATTTCTGAGTCACAAATAGTTGATGTACTGAATTCAGCAAGGCTTGAAGCCAGTTTGAAACTACAGGGAGAGACCAATACTGAAAACAAATGGCCAGACTTAGCTACTTTATTGTGTGGCTTGTTATTGGTCCTTTCTTTCTTCAAGTATTTTTGTCAACCTTTGGAATTTTTGGCTCTTGGTTCTGTTGCCATTGGGTCCCCTAAAGTTGTATTCAGGACCATAGCTTCCATTAAGGCTCTTTCTCTTAATATCAACATTTTGGTTCTAATAGCAGTGTGTGTTACTGTTGCTTTACAAGATTTTTTGGAGGCTGGAGTCATCATTTTCCTATTTTCCATTTCTCAATGGCTTGAGACAAGAGCAACTCACAAGGCAGTGGTTGCCATGTCCTCTTTAACAAGCATGGCTCCTCAAAAGGCCGTTATCGCCGAGACTGGGGATCGCATAGATGTCAATGATGTTAAGATTAACACCATCCTTGCAGTCAAGGCAGGTGATGCTATTCCTCTTGATGGAGTCGTGGTGGACGGAAAATGTGAAGTTGATGAAAAAATGTTAACCGGAGAATCATTCCCTGTCACCAAAGAGTTGGATTCAATAGTCTGGGCTGGAACAATTAATCTGAATGGATATATAAGTGTAAAAACTACTGTGTTGGCGGCAGACACGGTAGTAGCAAGAATGTCAAAGCTTGTTGAAGAGGCTCAAAGCAGAAAATCTCGAGCACAAAGGATCATAGATAATTTTGCGAAGTACTATATTCCAGTGGTTGTGTTGATTTCAGCTAGCATTGCTGTTGTTCCAGCTGCATTAGGAGTTCCGGATATCAAGCGTTGGTTTCAGCTGGCGACTGTGGTTTTATTGAGTGGATGCCCTTGTGCTCTCATCCTCTCTACGCCTGTTGCAATCTTTTGTGCTCTTACAAAAGCTGCAACAAGTGGTTTACTACTGAAAGGTGGAGATTATCTTGAAACACTTTCTGGAGTTAAGACAGTGGCTTTTGATAAAACAGGCACAATAACAAGAGGAGAGTTCACAGTAACAGATTTTTGTGCAGTTGTAGATGATATTAACATTGAAACCTTATTGGTTTCAAGTATTGAGAGTAAATCAAGTCATCCTATGGCAGCTTCACTAGTGGAATATGGAATGTTGCACTCTATCAAACCAATCCCTGAAAATGTGGAGAATTTTCAAAATTTTCCCGGTGAAGGAATTTATGGTAAAATTGATGGGGAAGATATCTATATAGGCAATAGGAGAGTTGGTTCCAGAGCTGGTTGTGAAAGAGATCCAGTGTCTCAATTCCAAGAAGAAAGAAATGGCTATATATACTGTCGATCAACTCTGATCGGAGTCTTTAGCCTAGCCGATACTTGCCGATCAGGTGCTTTGGAAGCAATAGAAGAGCTAAAGTCATTAGGTGTGAGATCAGTTATGCTAACAGGAGATAGCACTCAGGCTGCTAACTATGTTCAGAGTCAGTTGAATCATGCACTAGACGTTGTTCATGCCGAGCTTTTACCTGAGGAAAAGGCTATGATTGTTAAGAATTTCAAGAAAGATGGACTAACAGCAATGGTTGGAGACGGCATTAACGATGCTCCTGCATTAGCTACAGCTGACATTGGTATCTCAATGGGAATAGCTGGTTCAGCTCTCGCAATTGAGACAGGTAATGCGATTCTCATGTCAAATGACATCCGAAAAATACCTGAAGCCATTCAGCTAGCAAGAAAAACTACCAGAAAGCTCATTGAGAATGTTATAATTTCAATCAGCACCAAGATTGCCATACTAGTATTGGCAATTGCAGGGTATCCAATTGTTTGGCTTGCTGTTTTGACTGATGTTGGAACCTGTTTACTTGTGATTCTCAATAGCATGTTACTTTTACAAGAGAAACCGAAATATGATGAAGGACAATCTAGAAATAGAAGTCCTAAATATGGAACCTTCTTGGAAGATAAGAACATTACTCTACTTGACAACCAAAGTAATAATGATGAGCAGCTTGGGCTTCTTACTCCGGAAAAATGTGGCAAAAAATGCTGTAAAAGTGAAACTAATCTTGCGTCGGCTACAATTTCAAGTAAAGATGAGTCTCTTGGGCTTTCAAAGTTGGTGTTGGATGAAGTTCATTCAGTGAAACCTTGCAATGATTGTTGTTTACCTGAAGTGAAAATGTGTCAGGAATCCTCATGCAGCAAAAAGAATAGCAGTGATTGTTGCCAGCTAAAAAAAGAAGTGCACATTAAGGATAAAAAATGTAGCACCGGATCTGTTGTACTTGTGACACATGATGCTACCTTGGAATCTGCTTCTTACAAGGACAAATCTATGGATAGTTCGGAGTTGTCGGGGACAAGTGGGATTCCGAAGTGCTGCAAAAGAGGATGCTGTAATGATCTTGTGTATGATATTGGTAGCTTAAATGAAGTTGTTATACAGTGA 2658 0.3973 MLILISNFHFSFAMVENMKRSKFEVLGLCCATEAELIERILKPLNGVNDISVTVPTRTVTVTYNVLFISESQIVDVLNSARLEASLKLQGETNTENKWPDLATLLCGLLLVLSFFKYFCQPLEFLALGSVAIGSPKVVFRTIASIKALSLNINILVLIAVCVTVALQDFLEAGVIIFLFSISQWLETRATHKAVVAMSSLTSMAPQKAVIAETGDRIDVNDVKINTILAVKAGDAIPLDGVVVDGKCEVDEKMLTGESFPVTKELDSIVWAGTINLNGYISVKTTVLAADTVVARMSKLVEEAQSRKSRAQRIIDNFAKYYIPVVVLISASIAVVPAALGVPDIKRWFQLATVVLLSGCPCALILSTPVAIFCALTKAATSGLLLKGGDYLETLSGVKTVAFDKTGTITRGEFTVTDFCAVVDDINIETLLVSSIESKSSHPMAASLVEYGMLHSIKPIPENVENFQNFPGEGIYGKIDGEDIYIGNRRVGSRAGCERDPVSQFQEERNGYIYCRSTLIGVFSLADTCRSGALEAIEELKSLGVRSVMLTGDSTQAANYVQSQLNHALDVVHAELLPEEKAMIVKNFKKDGLTAMVGDGINDAPALATADIGISMGIAGSALAIETGNAILMSNDIRKIPEAIQLARKTTRKLIENVIISISTKIAILVLAIAGYPIVWLAVLTDVGTCLLVILNSMLLLQEKPKYDEGQSRNRSPKYGTFLEDKNITLLDNQSNNDEQLGLLTPEKCGKKCCKSETNLASATISSKDESLGLSKLVLDEVHSVKPCNDCCLPEVKMCQESSCSKKNSSDCCQLKKEVHIKDKKCSTGSVVLVTHDATLESASYKDKSMDSSELSGTSGIPKCCKRGCCNDLVYDIGSLNEVVIQ 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1099 885 Gene3D - 412 528 IPR023299 GO:0000166
Lal5g1099 885 Pfam haloacid dehalogenase-like hydrolase 397 610 - -
Lal5g1099 885 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 152 700 - -
Lal5g1099 885 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 174 678 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal5g1099 885 SUPERFAMILY Calcium ATPase, transmembrane domain M 152 687 IPR023298 -
Lal5g1099 885 Pfam E1-E2 ATPase 211 379 - -
Lal5g1099 885 Gene3D - 190 304 - -
Lal5g1099 885 SFLD p-type atpase 384 649 IPR044492 -
Lal5g1099 885 SUPERFAMILY HMA, heavy metal-associated domain 14 85 IPR036163 GO:0046872
Lal5g1099 885 PRINTS P-type cation-transporting ATPase superfamily signature 250 264 - -
Lal5g1099 885 PRINTS P-type cation-transporting ATPase superfamily signature 401 415 - -
Lal5g1099 885 PRINTS P-type cation-transporting ATPase superfamily signature 520 531 - -
Lal5g1099 885 PRINTS P-type cation-transporting ATPase superfamily signature 542 552 - -
Lal5g1099 885 PRINTS P-type cation-transporting ATPase superfamily signature 596 615 - -
Lal5g1099 885 ProSitePatterns E1-E2 ATPases phosphorylation site. 403 409 IPR018303 -
Lal5g1099 885 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 17 768 - -
Lal5g1099 885 SUPERFAMILY HAD-like 399 697 IPR036412 -
Lal5g1099 885 Gene3D - 392 647 IPR023214 -
Lal5g1099 885 SUPERFAMILY Calcium ATPase, transduction domain A 216 300 IPR008250 -
Lal5g1099 885 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 152 699 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lal5g1099 885 CDD P-type_ATPase_HM 117 698 - -
Lal5g1099 885 SFLD Haloacid Dehalogenase 384 649 - -
Lal5g1099 885 ProSiteProfiles Heavy-metal-associated domain profile. 20 86 IPR006121 GO:0046872
Lal5g1099 885 Gene3D - 14 88 - -
Lal5g1099 885 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 17 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1099 Lal-Chr5 13548599 13556964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1099 16 817 Primary Pumps ATPases AT4G30110 53.471 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1099 K01534 - gmx:100815324 1234.94