Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1089 ATGGTAAGAGACATGAATATGATGAGTTACAATAATAATAACAATAGTCATAATTCATCATCATCATTTGTAGAAGAGTATGGTGGAGAAGGAAGAAACATGAATGTGAAACCTGCATGGCTAGAGAGACTTATGGCTGAGACATTCTTTGGTGGGTGTGGGGTCCACCAAAACCATAGGAAGAACGAGAAGAACATCTTTTGCTTACACTGTTGTCTTAGCATTTGTCAACACTGCTTCCCTTCACATCACCCTCACCCTCTACTTCAGGTGCGAAGGTATGTTTACCACGACGTTGTCCGATTGGAAGACCTGGAAAAGCTCATCAATTGCTCCAATATTCAGTCCTATACCATAAACAGTGCAAAAGTGATATTCTTAAATCAGAGGCCACAATCAAAGTCTTGCAAAGGCACTGCCAACGCTTGTTACACTTGTGACAGGATTCTTCAAGAGCCCTTCCTCTTCTGTTCTCTCTCATGCAAGGTTGATTACATGGTGTATGAAGGTGAAAGCTTATCCAGCATTTTACATAGATTCGATGAATCTGACTTTTCAATTTCGCAGTTCGAGTGTTTAAGGGTCGATTGTTCTGAGGTTATTGATGAAGATACCCATTTTGCCCCTACCTCCTCTTACTCAAACACTGAGGCTACAAGCAATTCCGTAATTTCCTGTGAACCCCACAACATAAGGAAGAAGAGTAGGACAAATAGGTTCATCCATGGGATCGTCCTTCCTCTTGGAAGCAGAAGAAAAGGTGCTCCTCATAGGGCTCCCCTATCCTAA 789 0.4195 MVRDMNMMSYNNNNNSHNSSSSFVEEYGGEGRNMNVKPAWLERLMAETFFGGCGVHQNHRKNEKNIFCLHCCLSICQHCFPSHHPHPLLQVRRYVYHDVVRLEDLEKLINCSNIQSYTINSAKVIFLNQRPQSKSCKGTANACYTCDRILQEPFLFCSLSCKVDYMVYEGESLSSILHRFDESDFSISQFECLRVDCSEVIDEDTHFAPTSSYSNTEATSNSVISCEPHNIRKKSRTNRFIHGIVLPLGSRRKGAPHRAPLS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1089 262 MobiDBLite consensus disorder prediction 1 24 - -
Lal5g1089 262 Pfam PLATZ transcription factor 92 163 IPR006734 -
Lal5g1089 262 ProSiteProfiles Zinc finger B-box type profile. 53 102 IPR000315 GO:0008270
Lal5g1089 262 PANTHER - 38 262 - -
Lal5g1089 262 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 38 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1089 Lal-Chr5 13421477 13426559 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal5g1089 PLATZ 2.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1089 - - lang:109334055 421.394