Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1086 ATGGAGATGAAATTCCCATCAAATGTGAATAGCAGCAATATTCCTGTGTGTTCTGCCACGGGGAATGCTTCACATGTGGACCAGAGTTTCTGTGGCTATATGCAGCAGCCTGATTTTGTGAGTGGATGGATGTATGTGAATGAACATGGACAAATGTGCGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTACTGGTTTCTTGCCACACGAGCTTCCTGTGTATCCTTTGATCAATGGCAGGTTAATGAACCATGTGCCATTGAATTATTTCAAACAGTTTCCTGACCATGTTTCCACTGGGTTTGCACATTTGACTCTAAGCATCTCAGACACAAGGATGCCTTCAAATTGCTCCTCCTCCTTGTCTTGTAAGGATATGACAGTATACGAGCAAGATAGATCCTTTGGGAATGCTTTTCCCCTGGATGCTAAGTCTGATTTACAGTCACATGTCAATTACTGCCTGAATGAGTCCAATCACCTAATTTCAAACTCAGAGGCGTTCAGCAGTATGATATCTTCTCAGATGTTAGTTGAAGAGTGCTGTTGGTTTTACGAGGATGAAAATGGTATGAAACACGGGCCACATTCTATTTCAGATTTGATTTCCTGGCACCGACATGGATATCTTAAAGATTCATCTATGATCTCTCGTTCTGACAATAAGTGTTCTCCCTTTATGCTACAATCTGCTGTAAATGCATTTGAAGGAGAAACCATATGTAGAGCAGGTTCAAAAAGTAATGATGTTGATGGTAGGGGAAACATAATTTGTGAAATATCTGAGAGCATCTCTTCCCAATTACACTTAGGTGTCATGAAAGCTGCACGCAGAGTTGTGCTAGATGGGATTATTGGCGATATCATTGCAGAATTTGTTACTGAAAGGAAATATAAGAAGCATAAGCTTGAATCAGCTGAACAGGCTTCTGAGACTTGCATGTTGGATAGCAAAAAGTCCAAGGTTGCCTTGGAGATCAGTAAAGGTACTGCCATTCCAAGTGAGCCTGCACCTTCCCATACTTTAGCTGATCAGGCTTGTCATGAAATTTCCAGATCATCTGCAACAACCATTAAATCAGTTGGAAGCATTGAAAACTATTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTTTTGATTATTGCATGCAAGTCATGTGGAATGCAGTGTTTTTTGACACTCTTTCTGACTACTTATTTTCCTGGAGGAAGAAGAAGCTTTGGTCCAATCCTAAGCATCAACCTGTTAATGGCTGTAGAGATTATGATGAAAAGAATCAAAATATTAAATCAGAAAATTTACTTCTCAGGTCAGGTTCCTCTGAATACAATGCTGATGGCTGTGATCAGTTTGGAGTGCTTGCAACTGAAAGAGATTATCATGCTCAATCATCTTTATCTTGTAGTGGCATTAGACATGGATACTTGCTAGAAGGTCGTAGAGTTTCACGCCGTCATCATAACTCTGAAGATTTGACATGCACAGTTTCACGCCTTCATCATAACTCTAAAGATTTGACATGCACAGTTTCACGCCCTCATCATAACTCTAAAGATTTGACATGCACAGTTTCACACCCTCATCATACCTCTAAAGATTTGACATGCATTCTTGAAAGTGTGGAGAATGAACTTCATGTCTCATCAATGGCGTGTTTTGTTGAATACGCTCATAGTTTTGTTGAAAAGGAAGTGGACAATTTATTTCATTCCCCAGAAAACAAATTGAATGAGGTTGCTGTTAGTGACTGTGTTTTTTCAGAGATACTTACTGATAAAACACCCGTGAAGGAAATACTAGATGGCCAATCTGTGGCTCCTACAAAAGAAAAGGATTTATTTTGCGAGTCTTCATCTAAAAACCCCATGTCTGATGTATTTGCAAATGCATTTAAGGAGTTGTGTGGATCTGTAGATGATGTTGTTGATGAGGAGGAGATTGGTGACATACCACCTGGATTTGAAGAGAACTTTCAAACAAGTTTGCTTCACTACAATTCTAAATTTCGACCTTCAAGGTTAATCGAATGTAATCCTAAGATGACAGGATATGTTGCAACTGCACTGTGCCGACAGAAGTTGCATGATGAAGTTATGGATGAGTGGAAGTCATTGTTTCTCGATTCTGCATTGAATAAAGTTTTTATAGCTTGTACCGTGAAGAAAAAATTTCAGTCTCATGATCATGAAAAAGGGAAAGCTTTCAATGCAAGCAAGAGACATTTGAATGATTCTACTTCTAGACTGGGAAGAATGATGGAAGGATCAAAAGTTTCTTCTGGAGTTCCTCTGGTCAGTGGAAAGCAAATATATTACCATGAGAAACTGTCACGGAAAGAGTTGGGTTCCTCTCAATCTGTATCAGTAGATGATTCTTGTCCTGGGAAGCAGCCTGTGGCTAAGTTAAGGAAACATGCTTCTGGTGATTTGGATAAGACTGCAGAAGTTAAACTAGCCTATACTAATAGTGGAAAGACAAGGATGATTAAAAGGAAGAAGGATGTATTTGCTAAGGGAAGGTCTTCCCCTGTAAATGTTAATGGTAGCTTGCACAGTGATCAATCATCGTTGAAGAATAAATCCAGTCCAAAAGTATTGAAGTTTTCACATACAGTTCAAAATGATGTTTTGGATGTCGTAAAATCTAATGAAAAGAGGCTTTCAACATCAATAGATAATAGTGTTGGCATGAGGAAGGGGATTAGAAGTGATGGGTGTGAAGGCACCATTCAAAGGAAGACCACTGGGCATAGCTCCAGAGAGATTCTTAATGTGAAAAGTACAGTATCAAAAACTAAAAGGAAGCATCTAATGGACCAGGATGATATGCCACCCTTACAGCAGCCTGGGAAGGTTTTGAAAATTTCAAATGGTAAGAAGCAGGGGGCTAGGAAACAGGTTATTGTGCCAAAGAAAAAATCTGCTAAATCCAAGCCGATGGATTTATGCCCTAGATCTGATGGATGTGCCAAGACTTCTATTGATGGGTGGGAATGGCATAAATGGTCTCAAAATGCCAGTCCTGCACTTAGAGCACGCGTCAGGGGCTTTCCATGTGTACAGAACAAGTTCACAGATTCTGATAATAATTTTACTCAGTTGTCGAATGGTAAGGGTCTTTCTGCTAGAACGAATAGGGTAAAATTGCGTCGTCTTCTTGCTGCTGTAGATGGTGCGGATCTTTTGAAAGTGCCTCAATTAAAGGCAAGGAAAAAACATTTACGTTTTCAAAGGAGCAAGATACATGACTGGGGCCTTGTTGCCTTGGAGCCAATAGAGGCAGAGGATTTTGTGATTGAATATATTGGAGAACTAATCCGTCCTCGGATATCTGATATACGCGAACGTCAGTATGAAAAGATGGGAATTGGAGGCAGTTACCTCTTTAGAATTGATGATGATTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCAAGATTTATTAACCATTCCTGTGAGCCCAACTGCTACACAAAAGTTATATCTGTCGAGGGTCAAAAGAAGATTTTCATATATGCAAAGCGGCATATAGCCGCTGGCGAAGAAATTACATACAATTATAAGTTCCCCTTGGAAGAGAAAAAGATTACCTGCAATTGTGGTTCCAGAAATACTTACTAA 3633 0.3972 MEMKFPSNVNSSNIPVCSATGNASHVDQSFCGYMQQPDFVSGWMYVNEHGQMCGPYIKEQLYEGLTTGFLPHELPVYPLINGRLMNHVPLNYFKQFPDHVSTGFAHLTLSISDTRMPSNCSSSLSCKDMTVYEQDRSFGNAFPLDAKSDLQSHVNYCLNESNHLISNSEAFSSMISSQMLVEECCWFYEDENGMKHGPHSISDLISWHRHGYLKDSSMISRSDNKCSPFMLQSAVNAFEGETICRAGSKSNDVDGRGNIICEISESISSQLHLGVMKAARRVVLDGIIGDIIAEFVTERKYKKHKLESAEQASETCMLDSKKSKVALEISKGTAIPSEPAPSHTLADQACHEISRSSATTIKSVGSIENYWWSYAVVRKVLFDYCMQVMWNAVFFDTLSDYLFSWRKKKLWSNPKHQPVNGCRDYDEKNQNIKSENLLLRSGSSEYNADGCDQFGVLATERDYHAQSSLSCSGIRHGYLLEGRRVSRRHHNSEDLTCTVSRLHHNSKDLTCTVSRPHHNSKDLTCTVSHPHHTSKDLTCILESVENELHVSSMACFVEYAHSFVEKEVDNLFHSPENKLNEVAVSDCVFSEILTDKTPVKEILDGQSVAPTKEKDLFCESSSKNPMSDVFANAFKELCGSVDDVVDEEEIGDIPPGFEENFQTSLLHYNSKFRPSRLIECNPKMTGYVATALCRQKLHDEVMDEWKSLFLDSALNKVFIACTVKKKFQSHDHEKGKAFNASKRHLNDSTSRLGRMMEGSKVSSGVPLVSGKQIYYHEKLSRKELGSSQSVSVDDSCPGKQPVAKLRKHASGDLDKTAEVKLAYTNSGKTRMIKRKKDVFAKGRSSPVNVNGSLHSDQSSLKNKSSPKVLKFSHTVQNDVLDVVKSNEKRLSTSIDNSVGMRKGIRSDGCEGTIQRKTTGHSSREILNVKSTVSKTKRKHLMDQDDMPPLQQPGKVLKISNGKKQGARKQVIVPKKKSAKSKPMDLCPRSDGCAKTSIDGWEWHKWSQNASPALRARVRGFPCVQNKFTDSDNNFTQLSNGKGLSARTNRVKLRRLLAAVDGADLLKVPQLKARKKHLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGGSYLFRIDDDYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEEKKITCNCGSRNTY 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1086 1210 MobiDBLite consensus disorder prediction 845 864 - -
Lal5g1086 1210 Pfam SET domain 1087 1191 IPR001214 GO:0005515
Lal5g1086 1210 MobiDBLite consensus disorder prediction 842 864 - -
Lal5g1086 1210 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1208 IPR044570 GO:0042800|GO:0051568
Lal5g1086 1210 MobiDBLite consensus disorder prediction 961 987 - -
Lal5g1086 1210 SMART set_7 1075 1198 IPR001214 GO:0005515
Lal5g1086 1210 ProSiteProfiles SET domain profile. 1075 1192 IPR001214 GO:0005515
Lal5g1086 1210 Gene3D - 172 259 IPR035445 -
Lal5g1086 1210 SUPERFAMILY GYF domain 177 230 IPR035445 -
Lal5g1086 1210 SUPERFAMILY SET domain 1070 1208 IPR046341 -
Lal5g1086 1210 ProSiteProfiles GYF domain profile. 183 239 IPR003169 GO:0005515
Lal5g1086 1210 Gene3D SET domain 1019 1210 IPR046341 -
Lal5g1086 1210 CDD SET_SETD1 1063 1208 - -
Lal5g1086 1210 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1208 - -
Lal5g1086 1210 Pfam GYF domain 186 227 IPR003169 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1086 Lal-Chr5 13365958 13381766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1086 1066 1208 C2H2 Transcription Factor Family AT2G23740 38.182 1.43e-16 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal5g1086 SET 7.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1086 - - lang:109334426 2225.67