Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1074 ATGGCTTCTTCATTTTCCCTTTATCAATCAACTCAATGCTTCTTCTCCAATACCCAGTTCAAAGGTTTCCGCCATGGTTTTTCATGGCGACCCACTTATCCATTTGATTCTCATGTTGAAAACAAAGTTCGACCCATCAAAGCTTCGGTTGATGTAGCTTCCTTTCCATTGTTTCAGACCCCCAAAGTTGAAGAGCCATCTTCTGATGGGTTGGAGCCTGCAGATCCTGATTTTTACAAGATAGGTTATGTCCGAAGTGTGCGAGCTTATGGAATTGATTTTAAGGAAGGGCCAGATGGGTTTGGTGTGTATGCTTCCAAAGATGTAGAACCTCTTCGCCGAGCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGTTAACTATAAGCAAGAAACTTCCGTGGATGTTTTTCCCTGATATAATCCCAGTGGGTCATCCAATATTTGATATTATCAACTCGACAAATCCAGAGACAGATTGGGACCTAAGGTTAGCGACTCTCCTCTTATTTTCATTCGACTGCGAAGACAACTTTTGGCGGTTGTATGGTGATTTTCTACCCAGTGCAGACGAGTGCTCTAGCTTACTTATGGCTACAAAGGAGGAACTTTTGGAGTTGCAAGATCCCGATCTTGCTTCTACAATAACAAACCAACAACAACGAGCCTTAGAATTCTGGGAGAAGAATTGGCACAGTGGTGCACCTCTTAAAATAAAGCGTCTTGCTCGCGATCCTGAAAGGTTCATTTGGGCAATGGGTATTGCACAATCACGATGTATTAACATGCACATGAGAATTGGTGCACTAAACCAAGATGCAAATATGCTGATTCCTTATGCTGACATGCTGAACCATTCATTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACCGGATGCTTGAAGTTCTTATAAATGCTGGACAACAGATTAAAAAGGGAGACGAGATGACAGTTAATTACATGAGCAGAGAAACGAATGATGTGTTAATGCAAAGATATGGATTTTCATCTCCTGTGAATCCTTGGGATGTGATCAAGTTCTCAGGCAATACACATATTCATTTGGACTCCTTCTTGTCAATCTTCAATATATCTGGCCTTCCTGAAGAATATTACCATAACAATCGTCTATCGAACGCTGGAGATACATTTGTTGATGGAGCAGTCCTTGCTGCAGCACGAACATTGCCGACTTGGTCAGATGGGGATGTACCCCCAATCCCTAGTGTGGAAAGAAAAGCTGCAAAGGAGTTACAAGGAGAATGCCAGCGTATGCTTTCAGCATTTGCTACAACCGCTAAGCAAGACCAGAAATTGCTAGATTCCATGCCAGAAGCTACAAGGACACTTGAAGCTGCAATAAAGTATAGATTGCACAGAAAATTGTTCATTGAGAAAGTTATCCAAGCATTGGAGATTTATCAAGAGAAAATACTGTTCTGA 1452 0.4139 MASSFSLYQSTQCFFSNTQFKGFRHGFSWRPTYPFDSHVENKVRPIKASVDVASFPLFQTPKVEEPSSDGLEPADPDFYKIGYVRSVRAYGIDFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLATLLLFSFDCEDNFWRLYGDFLPSADECSSLLMATKEELLELQDPDLASTITNQQQRALEFWEKNWHSGAPLKIKRLARDPERFIWAMGIAQSRCINMHMRIGALNQDANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQQIKKGDEMTVNYMSRETNDVLMQRYGFSSPVNPWDVIKFSGNTHIHLDSFLSIFNISGLPEEYYHNNRLSNAGDTFVDGAVLAAARTLPTWSDGDVPPIPSVERKAAKELQGECQRMLSAFATTAKQDQKLLDSMPEATRTLEAAIKYRLHRKLFIEKVIQALEIYQEKILF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1074 483 SUPERFAMILY SET domain 99 339 IPR046341 -
Lal5g1074 483 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14 51 476 - -
Lal5g1074 483 Pfam SET domain 100 323 IPR001214 GO:0005515
Lal5g1074 483 Gene3D set domain protein methyltransferase, domain 1 84 338 - -
Lal5g1074 483 ProSiteProfiles SET domain profile. 79 324 IPR001214 GO:0005515
Lal5g1074 483 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 335 476 IPR036464 -
Lal5g1074 483 Gene3D - 357 481 IPR036464 -
Lal5g1074 483 CDD SET_LSMT 91 338 - -
Lal5g1074 483 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 51 476 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal5g1074 SET 2.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1074 - - gmx:100790985 839.336