Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1051 ATGCTTTATTTTCTTAGCAAAACCCTTTCCCCCAAACTAATTCTATCTCAAAATCACCCATTCTCATGGATTTCTTTGAGATTCATCTCCACAACTTCAAAATCAAAAGATCACTCTTTTACACTCTCATACCTCATTAACACTTGTGGTTTTTCACCTCAACGTGCTGCTACCATTTCTAACAACATCAATTTCAAAACTCGTGAAAAACCAGACTCAGTTATTGAGTTCTTAATGAACCATGGTTTCTCACAATCCAATGCATTAAGTCTTATTAGATCAGACCCATCACTCCTTCAATCTTCTGATCCCAACAAATTCTTTTTGCCCAAAATTGAATTTTTGAAGTCTAAAGGCTTTTCTGATTCTGATATACTCACCCTTTTAATCAAGTTCCCTACCATCCTTAAGAGAAGTTTGGAGAATGAAATTATACCCTCTTTTGATTTCTTTAAGGATATGTTTCGGTCAGAACACAAAATGTTTAAGACTGTTATGCGCCATTCGGGTATTTTATACGGCCTTAATAGCTGCATTGCACCAAATATCAAACTCCTTAGGGAAGAAGGAATTCCTGAATCTCATATTGTTCAATTTGTAGAATACTATCCTCGATCTTTGAAAGTGTCTCCTGAGAGGTTTAAGGAGACTGTGGAGGAAGTGAAGAAATTGATGTTTGATCCTTTGAAGAAGCGATTTGTTGTAGCTATTCATGTAAAGAGATGCATAACCGGATCCACTTGGGAAAGGAAGGAAGGTATTTATAGAAGGTGGGGTTGGACCGATGATGATTTTCGTGCAGCGTTTAAACTTCATCCGTTCTGTATGTCAATGGCAGACAGTAAGATTGAGGCAGTCATGGAATTTTTGGTGAACAAAATGGGTTTTAAGTCAACTGCTATTGCCCAACATTCAGTACTGCTGACCTTGAGCTTGGAAAAACGAATTATTCCGCGGGGTTCGGTTGTTCTAGCTTTGTTGTCAAAGGGTCTGGTGGAGAATCTAAACTTGAGTCCAATATTCAAGACCGTCGAAAATGTCTTTTTGGATAAGTTTATCTATTGTCATGAGAAGAAGGAAGCCAATGAGCTATTGAAGCTGTATCAGGCTAAATTGGCTCTCGCAGGGTAA 1131 0.3802 MLYFLSKTLSPKLILSQNHPFSWISLRFISTTSKSKDHSFTLSYLINTCGFSPQRAATISNNINFKTREKPDSVIEFLMNHGFSQSNALSLIRSDPSLLQSSDPNKFFLPKIEFLKSKGFSDSDILTLLIKFPTILKRSLENEIIPSFDFFKDMFRSEHKMFKTVMRHSGILYGLNSCIAPNIKLLREEGIPESHIVQFVEYYPRSLKVSPERFKETVEEVKKLMFDPLKKRFVVAIHVKRCITGSTWERKEGIYRRWGWTDDDFRAAFKLHPFCMSMADSKIEAVMEFLVNKMGFKSTAIAQHSVLLTLSLEKRIIPRGSVVLALLSKGLVENLNLSPIFKTVENVFLDKFIYCHEKKEANELLKLYQAKLALAG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1051 376 Pfam mTERF 64 231 IPR003690 GO:0003690|GO:0006355
Lal5g1051 376 Pfam mTERF 256 348 IPR003690 GO:0003690|GO:0006355
Lal5g1051 376 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 24 373 - -
Lal5g1051 376 PANTHER CGI-12 PROTEIN-RELATED 24 373 IPR003690 GO:0003690|GO:0006355
Lal5g1051 376 SMART mt_12 197 227 IPR003690 GO:0003690|GO:0006355
Lal5g1051 376 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Lal5g1051 376 SMART mt_12 162 192 IPR003690 GO:0003690|GO:0006355
Lal5g1051 376 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Lal5g1051 376 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Lal5g1051 376 SMART mt_12 89 121 IPR003690 GO:0003690|GO:0006355
Lal5g1051 376 Gene3D Transcription termination factor 3, mitochondrial 157 362 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1051 Lal-Chr5 12890905 12892035 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal5g1051 mTERF 9.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1051 K15032 - twl:120012851 317.39