Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1046 ATGAAGCCCCAATCCATGTTCAAAGCGCTTCTCTCCTTGAATCTGAATTCTCTTCATTCAGCAACCACAAAATTCAACCCTTTTTTGCACCACTTTTCATTCAAATTCTACACAACCACTTCAGATCCAAAATCATTTGCTGTTTCTTACCTCATCAACAATTTTGGGTTCTCCCCAGAATCTGCTCTTAAAGCTTCAAACTGTGTTCATTTCAAGACCCAACAAAAACCTGATTCTGTTCTCACTTTCTTCAGAAACCATGGTTTCTCTGACTCAGATCTTTTTAGTGTCATCAGAAAGGAACCATGGCTCCTTTCATGTGATACCCACAAAAGGGTTTTGCCAAAGTTTCAATTTTTAATCTCAAAAGGTGCTTCTACATCTGACATTGTTCGCGTCGTCACGGTGAACCCAAGGTTCTTGAAACCAAGCTTGGAGAATTGTATAATCCCTGCTTATGAATTGGTAAATAAATTTCTTCAATGTGAGAAGAAAACATTTGCTACTATAGTTGGTTGTCCTTCTTTGCTTTATTGTGATTCTGTAGTATTTAATATCAAATTTATGGTTGATAATGGTGTAGCTAGTTTGAACATTTATAGAATTCTTCGACTTAGGCCTTATATATTGTGTTATGGTGATTTGAAGAATACAGTGTTGGAGTTAAAATGTTTGGGAATTGATCCATCCAAATCATACTTTGCTGATGCAATGCTTGCTAAAAGAGCGACGACCGGATTGCAATGGAGCGATAAAATTGATACCTTTAAGAAGTGGGGGTGGTCTGATGAAACAATTTTGGAAGCATTTAAGAAGCAGCCAATGTGTATGTTAACATCGAGTCAAAAAGTCGACAAGGTGATGAGATTTTGGGTAAATAAGTTAGGCTGGGATTCTTCTCACCTTGTCAAGGCACCGGGAATTTTCGGATATAGTTTGGAGAAACGGATCATACCTAGAGCTTCGGTTATCAATTATCTTTTATCCAAAGGATTGAGAAAAGAGAGTTCTAGCTTTCTTACACCATTTTTTATGACTGATGAGTCGTTCCTGGAAAAGTTCGTGATGTGTTTTGATGACGAGGAAGCTTCTCAGCTATTAAAGCTATATCGGGAAAACATGGATCTTCAAGATTGTTTTGCTGGGATGATTTAG 1155 0.3749 MKPQSMFKALLSLNLNSLHSATTKFNPFLHHFSFKFYTTTSDPKSFAVSYLINNFGFSPESALKASNCVHFKTQQKPDSVLTFFRNHGFSDSDLFSVIRKEPWLLSCDTHKRVLPKFQFLISKGASTSDIVRVVTVNPRFLKPSLENCIIPAYELVNKFLQCEKKTFATIVGCPSLLYCDSVVFNIKFMVDNGVASLNIYRILRLRPYILCYGDLKNTVLELKCLGIDPSKSYFADAMLAKRATTGLQWSDKIDTFKKWGWSDETILEAFKKQPMCMLTSSQKVDKVMRFWVNKLGWDSSHLVKAPGIFGYSLEKRIIPRASVINYLLSKGLRKESSSFLTPFFMTDESFLEKFVMCFDDEEASQLLKLYRENMDLQDCFAGMI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1046 384 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 20 378 - -
Lal5g1046 384 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Lal5g1046 384 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Lal5g1046 384 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Lal5g1046 384 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Lal5g1046 384 SMART mt_12 200 228 IPR003690 GO:0003690|GO:0006355
Lal5g1046 384 PANTHER CGI-12 PROTEIN-RELATED 20 378 IPR003690 GO:0003690|GO:0006355
Lal5g1046 384 Pfam mTERF 251 350 IPR003690 GO:0003690|GO:0006355
Lal5g1046 384 Pfam mTERF 81 212 IPR003690 GO:0003690|GO:0006355
Lal5g1046 384 Gene3D Transcription termination factor 3, mitochondrial 170 361 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1046 Lal-Chr5 12839473 12842114 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal5g1046 mTERF 5.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1046 K15032 - gmx:102663414 358.221