Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1041 ATGCTTAGTCACGAAGGAGACCTTAAAATAAGCTTTGGCTATCAATGTGATAGTAGTAGAGGTATCCCGTGCAAGGTTGCCAATGACTATAAGGGCCTTCCTATGGTCCATAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCAGCCTTAAGTGCAAATGCTACACTTGCTAACACAAACATCTGCAACGGTGTAATAGGAGAAGAAATCCTTCCAAATCTTGACTCTCCTACATCATTTCGTAGGGTACCCTCTTCCCCGAGTCTTTCGAAGTTGGACATACTATCATCTTCTCTTCAGAGTAATTTGTCAAACCTAAGTTGCAGCCCATCCACTCCAAGTGATATGCTTGAGTGTGACCCTTTTTCATTAAAATCCATGAGTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGCTACGGAAGTTCAAGTAGCAGGAGGAGCAGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAACTGGGTGGCTCTTCTGTGCAATTTATGACGGCTTTAATGGGAGAGATGCGGCTGACTTTCTAGCCGGTACCCTTTATGACACTATCATATGTTATTTTAGTATGTTATGTTGGGATTTGGAACCAGATTCCATCAAAGCTTGTGACAATGATGATTTCGGCAGATCTTTTCAAAATAAGTTGGATGATAGTCTTCATGATCATCAATCTCCATCGAGATTTAACGAAAACAACTCTAGTCTTGGATGTTTCGTGAACAGTAGTACTTCACCTTCCAAGTCAGAAGCATCGCTTAAATCATTTTCACATGAGGTACTTGATAGCCTCCAACGTGCTCTCAGTCAGGCTGAGAATGACTTCTTATACATGGTTGAGCAGGAAATGGAGGAGCGTCCAGATTTAGTTTCTGTTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAACAATTTGTATACACTTAATCTCGGTGACAGCAGAGCAGTTTTGGCAACATACAGTACATGTGACAAAATGAATGGGAATAAGAGAATGAAAGCTGTCCAGCTTACAGATAGCCATACTGTTGACAATGAAGTTGAAAGAGCCGAACTTCTTGCCGGTCATCCTGATGATCCTAATGCCATCGTAGCAGGGAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTTGGAGTTGGCTACTTGAAAAAGTCTTTCGGAGAAGCAAAGAAAAATCTGAACGATGCATTGATGGGAATCCTCCAAGTTCGTGATCTTAAAAGCCCGCCATATGTTTCCACTGAACCGTCACTGAACGTGCATAAAATCTCAAATTCTGATCAATTTGTTATAGTTGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTTGTAGAGTCATATATCTTGAACAATCCTTCTTGTGACCCTGCAAAGTTTCTTATTGAGCAGCTTATAGCAAGAGCAGCAGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCGGCCGGGAGGCGGAGGAAGTACCATGATGATGTGACTGTAATTGTGATCATCCTTGGTATGAATAAACGGACTTCAAAGGCATCAATTTGCATATGA 1587 0.4152 MLSHEGDLKISFGYQCDSSRGIPCKVANDYKGLPMVHRTSSFSCLSGAALSANATLANTNICNGVIGEEILPNLDSPTSFRRVPSSPSLSKLDILSSSLQSNLSNLSCSPSTPSDMLECDPFSLKSMSAPSRSEGFLNATEVQVAGGAAGEDRVQAVCSEETGWLFCAIYDGFNGRDAADFLAGTLYDTIICYFSMLCWDLEPDSIKACDNDDFGRSFQNKLDDSLHDHQSPSRFNENNSSLGCFVNSSTSPSKSEASLKSFSHEVLDSLQRALSQAENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGNNLYTLNLGDSRAVLATYSTCDKMNGNKRMKAVQLTDSHTVDNEVERAELLAGHPDDPNAIVAGKVKGKLKVTRAFGVGYLKKSFGEAKKNLNDALMGILQVRDLKSPPYVSTEPSLNVHKISNSDQFVIVGSDGLFDFFSNDEAVKLVESYILNNPSCDPAKFLIEQLIARAADSAGFSMEELMNIPAGRRRKYHDDVTVIVIILGMNKRTSKASICI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1041 528 ProSiteProfiles PPM-type phosphatase domain profile. 136 515 IPR001932 -
Lal5g1041 528 SUPERFAMILY PP2C-like 150 516 IPR036457 -
Lal5g1041 528 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 3 527 - -
Lal5g1041 528 CDD PP2Cc 149 515 IPR001932 -
Lal5g1041 528 PANTHER PROTEIN PHOSPHATASE 2C 3 527 IPR015655 GO:0004722|GO:0006470
Lal5g1041 528 Pfam Protein phosphatase 2C 261 469 IPR001932 -
Lal5g1041 528 Gene3D - 110 524 IPR036457 -
Lal5g1041 528 SMART PP2C_4 127 513 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1041 Lal-Chr5 12786140 12790205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1041 6 528 PP2C-type Phosphatase Gene Family AT3G16560 60.870 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1041 - - gmx:102666789 771.926