Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1037 ATGGACCCTCGATCATACGCAGTTGTAGAAGCAGCGGCGGCGGCGGCGCCGGAAATGAAAATGACCGTTCCACCCTCCGATACCACCACCAGCGCACTCGATTGCAACCTCACTTCTCTCTGTGACCATGTCCAAATTGAAGGCTTCAATTCCGGTTCCTTCTCCGATATCATTGTTCATGCTATGGGATCCACTTTCCGCCTCCATCGCCTCCTTCTCTCTCGCAGTTCCTATTTCCGGAACATGCTGCATGGGCCTTGGAAAGAAGCAACTGCTCCTGTTGTTACTCTTCATGTGGATGATAGTAATGTTAATGAAGAAGCTATCACTATGGCTTTGGCTTATCTTTATGGACATCATCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCCGCTGCATCCTTTCTCGATCTTCAGGATTTGTCCGCAATATGTACCGATTTCATTATATCTGAGCTCTGGACTTCAAACTTCTTGGCTTATCAGATGTTTGCGGAGAACCAAGACTATGGCGTTCATGGCGAGCGTGTTCGGACTGCTTGTTGGGGGTACCTCTGTCAAAGTGGCGGCGTGGAATTGAAAGAGGCGCTTCCTAAACTTTCATCTCAAACATTGCATACACTACTGACCAATGATGAACTGTGGATACCAAGTGAAGAGAAAAGGTTTGAATTGGCTTTGTACGCATTCTTGGCAAAAAATTCTCACCGGAAGGCCAAACATCCTGAGCATGGAAATTCTGGTTCTGAGTCTGGAATTGATATTCATTATGATTCTGATAATTCTAAGGGGAAAGGTGTCACTGATGGCTGGATGGATAAGGGGTTGGAAACTGATATAGGGAAAATGAGTCTGAAAAGTAATGAAAAGGATCCTAATGCTCATAATCTTGTAGTTGAGCTTGCGGACTTCAACAATGGGCTTTCTAGTTCCAATCAAAAGGCTGAAGAAACTTCATCTACCAGTTCATCATATGTGAAACCAACATATTCTTCCAACATGGAAGGACCTTCATCATTTGGTGATTCATTATCTGACACAGATGGGACTAAAACATCGTGGTCTTATGTTGAGATGCCTGTTGGTGCTGGAGCTTCTGGATTGGCTATTGAAGGGCCATCTGAGGAAGGACCTTTCTACCATTTGGATAACAACAGTTGGTTAGTTAGGGATCAATCAAGGCAATGCTTTTCATCTAATTCTTCTGTTAACGGCTTGACATCCAGTGACTGGGGGAGATATGGGGCACCTTTTTTCTCGTGGGGTGGACGGGTTGTTGGGAAAAGACATCTTCAGCCTCACTCTAAAGAAAACTATGGAGGCCATGGGGATGAATATGATGCATTTCTTAATATATTTGAAGGGGGGTCTCTTTTATACTGCAATATGTCTTTTGAGGCACTTCTCAATGCCAGAAAACAACTTGAAGAGTTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGAGTGCAAGAAATTGCTGCTGATACATGCAAAATTTGTTGCCTTCTGAGTATGGCCTGCACTTGCCGTCAGCCATTTGCATTTCCACATGGGGCTACTACCACTGGTTATTACATGCAAGAACATAACCAAAATATTATGCCAGGTAATGTGGGAAATATATATGTTGCTGATTCTTCTCAAGCTGAAGGAAATGGCATTTTTCGACCTGTACGTGTACATGTCAGAGGTGCCATTGATGGGCTTGTTGGTATTAGTCGTGGAACTACATTTGTTCCAGCAGCTTCTTCGCCTCCTACACGTTTTGTCTTTTCTCGTGTACCAATTGGTGTTGGAAGCAGAAACTACCCACAATCTGCAGCTAATGATGATTCAGAGACTCGGGCTGATCACAATGGTGATCTGTCTGGAGATGGTTTGACAGCTTTGGTTGGCTTAAGTCAGGGTGGGAGTAATGGAACAAATTTGCATGGTCAAAGGGGATATGAAATGGGGCAGCAAAGCAGAATGTCTGAAAATACTTCTGGAGGCCCAAGTACTGGCGGCATTCCGATGCAGATGTTAGAGACACCAGAACACAACATTGGAATGGAATGGGAGAATGCCAACAATTCTTCTATATCATTGGATTTGAAAACACCTTTAAACCATTTCCCTCCTTTTCGATTTGGAGTGCAGTTCGAGGATGTGCACAGGCTTGGTGACGGGCAGGTTAAGCATTCTCCTGAAACATTCTATGCTGGTTCTTTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAGGACCCTCAGGGAAGGCGAACACTAGGGTTGTTTCTTCATCGTCGGAAGGCAGAGATCACTGATATACATAGAAAGGTGCACATGTATGTCGACTCTCGCGAAAAGGTGACTGCTCGCTATCAGTTGATTTGTCCATCAAAGAGGGAAGTGATGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTGCCTAAAGCTCCAAAAGGATGGGGTTGGCGAACTGCTCTTCTATTTGATGAACTTGGTGATCTTCTCCAAAATGGGGCCCTAAGGATCATTGCTGTAGTACAGCTTGTTTGA 2580 0.4415 MDPRSYAVVEAAAAAAPEMKMTVPPSDTTTSALDCNLTSLCDHVQIEGFNSGSFSDIIVHAMGSTFRLHRLLLSRSSYFRNMLHGPWKEATAPVVTLHVDDSNVNEEAITMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLSAICTDFIISELWTSNFLAYQMFAENQDYGVHGERVRTACWGYLCQSGGVELKEALPKLSSQTLHTLLTNDELWIPSEEKRFELALYAFLAKNSHRKAKHPEHGNSGSESGIDIHYDSDNSKGKGVTDGWMDKGLETDIGKMSLKSNEKDPNAHNLVVELADFNNGLSSSNQKAEETSSTSSSYVKPTYSSNMEGPSSFGDSLSDTDGTKTSWSYVEMPVGAGASGLAIEGPSEEGPFYHLDNNSWLVRDQSRQCFSSNSSVNGLTSSDWGRYGAPFFSWGGRVVGKRHLQPHSKENYGGHGDEYDAFLNIFEGGSLLYCNMSFEALLNARKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKICCLLSMACTCRQPFAFPHGATTTGYYMQEHNQNIMPGNVGNIYVADSSQAEGNGIFRPVRVHVRGAIDGLVGISRGTTFVPAASSPPTRFVFSRVPIGVGSRNYPQSAANDDSETRADHNGDLSGDGLTALVGLSQGGSNGTNLHGQRGYEMGQQSRMSENTSGGPSTGGIPMQMLETPEHNIGMEWENANNSSISLDLKTPLNHFPPFRFGVQFEDVHRLGDGQVKHSPETFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELGDLLQNGALRIIAVVQLV 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1037 859 ProSiteProfiles BTB domain profile. 55 125 IPR000210 GO:0005515
Lal5g1037 859 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 16 859 - -
Lal5g1037 859 SMART BTB_4 55 155 IPR000210 GO:0005515
Lal5g1037 859 MobiDBLite consensus disorder prediction 241 274 - -
Lal5g1037 859 MobiDBLite consensus disorder prediction 310 349 - -
Lal5g1037 859 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 16 859 - -
Lal5g1037 859 Pfam BTB/POZ domain 49 153 IPR000210 GO:0005515
Lal5g1037 859 SUPERFAMILY POZ domain 49 153 IPR011333 -
Lal5g1037 859 Gene3D Potassium Channel Kv1.1; Chain A 27 188 IPR011333 -
Lal5g1037 859 MobiDBLite consensus disorder prediction 613 633 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lal5g1037 BTB 4.2e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1037 - - adu:107483601 1451.03