Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1019 ATGGTTTCCAAGGTTCACAAGAGAACAGCCATGTACAGGAACCTGCAACTACTTCGTTGGATCACATGTTCCCATTCGCAGCGAAAAACCTCAGTGTTGTTGGATGCGTCAAAGTACATACAAGGTATAAAGAAAAAGTTGCAAGAATTGAACCAATTAGCAGCTGCATCATCACAAAAATCAATTGCCTATGATCCAATGCCTAAGCTTAAAGTTGAACCACAAGAAGAGGGCTTTATGATCAAGGTGCAGAGTCAATGTAGTTGCCAAGGGTTACTTGTGTTCATACTAGAGGCCTTTGAAGAGTTGGGTCTTGATGTGCTCCAAGCTAGGGTTTCTTGTGAGGATAGGTTCTGTTTAGAAGCAATCGGAGTCAAAGAGAAAAATCAAGATACTCGCCATTTGGATGCACAATTAGTTGAACAAGTAGTGTTGAAAGCTATTCAAAACTGGAGGGAAGTTACACAGCAATTACCATCCATAAACTACTGTCCTAATAAATATTAA 507 0.4004 MVSKVHKRTAMYRNLQLLRWITCSHSQRKTSVLLDASKYIQGIKKKLQELNQLAAASSQKSIAYDPMPKLKVEPQEEGFMIKVQSQCSCQGLLVFILEAFEELGLDVLQARVSCEDRFCLEAIGVKEKNQDTRHLDAQLVEQVVLKAIQNWREVTQQLPSINYCPNKY 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1019 168 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 156 - -
Lal5g1019 168 PANTHER TRANSCRIPTION FACTOR BHLH93-LIKE PROTEIN 1 156 - -
Lal5g1019 168 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1019 Lal-Chr5 12581940 12583783 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1019 - - gmx:100809200 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1019 5 12581940 12583783 Lal5g1019 5 12581940 12583783 ECH
Lal5g1019 5 12581940 12583783 Lal22g0200 22 1249704 1251233 ECH
Lal5g1019 5 12581940 12583783 Lal4g1597 4 20152849 20155499 ECH
Lal14g0779 14 9661669 9663371 Lal5g1019 5 12581940 12583783 ECH
Lal9g1711 9 19355086 19356160 Lal5g1019 5 12581940 12583783 ECH
Lal5g1019 5 12581940 12583783 Lal3g0659 3 5146772 5153474 LSH